Streptomyces deccanensis: L3078_15105
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Entry
L3078_15105 CDS
T08215
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
sdec
Streptomyces deccanensis
Pathway
sdec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L3078_15105 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdec03400
]
L3078_15105 (recO)
DNA repair and recombination proteins [BR:
sdec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
L3078_15105 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
L3078_15105 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7573
ArfGap
Motif
Other DBs
NCBI-ProteinID:
ULR50520
LinkDB
All DBs
Position
complement(3384897..3385646)
Genome browser
AA seq
249 aa
AA seq
DB search
MSLFRDDGVVLRTQKLGEADRIITLLTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQ
FFARGSELIGRGLPLCTQSETIAPYGGGIVSDYARYTAGTAMLETAERFTDHEGEPAVQQ
YLLLVGGLRTLARGEHAPHLVLDAFLLRSLAVNGYAPTFSDCAKCGMPGPNRFFSVAAGG
SVCVDCRVPGSVVPSPQTLELLAALLTGDWETADASEPRHVREGSGLVSAYLHWHLERGL
RSLRYVEKS
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcttccgcgacgacggcgtcgtcctccgcacccagaagctgggggaggcggat
cggatcatcacgttgctcactcgggggcacgggcgggtgcgggccgtggcgcggggggtg
cggcggacgaagtcgaagttcggggcgcggctcgaacccttctcccatgtggacgtgcag
ttcttcgcgcggggcagcgagttgatcggccgcggtctgcccctgtgcacccagagcgag
accatcgctccgtacggcggcggcatcgtcagcgactacgcccgctacaccgccgggacg
gccatgctggagaccgccgagcggttcacggaccacgagggcgagcccgccgtgcagcag
tacctgctgctcgtcggcgggctgcgcaccctcgcccgcggtgagcacgccccgcacctc
gtcctcgacgccttcctgctgcgctccctcgccgtcaacggctacgcccccaccttcagc
gactgcgccaagtgcggcatgcccggcccgaaccggttcttctccgtcgccgccgggggc
tccgtctgcgtggactgccgggtgcccggcagcgtcgtaccctcgccacagacgctggaa
ctgctcgccgcgcttctcacgggagactgggagaccgcggacgcgagcgagccgcggcac
gtgcgggagggcagcgggctggtgtccgcctacctgcactggcatctggagcgcggcctg
cgctcccttcggtacgtggaaaagtcgtaa
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integrated database retrieval system
