Streptomyces deccanensis: L3078_16425
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Entry
L3078_16425 CDS
T08215
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
K10440
ribose transport system permease protein
Organism
sdec
Streptomyces deccanensis
Pathway
sdec02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
L3078_16425
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
L3078_16425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdec02000
]
L3078_16425
Transporters [BR:
sdec02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
L3078_16425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
BPD_transp_2
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
ULR50758
LinkDB
All DBs
Position
3694889..3696850
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AA seq
653 aa
AA seq
DB search
MAADTLKSSTGASGASGASGLRRLLLDNGALTALIVLVVAMSVLSGDFLTADNLLNIGVQ
AAVTAILAFGVTFVIVSAGIDLSVGSVAALSATVLAWSATSEGVPVPIAVLLAVVTGIAC
GLVNGFLISYGKLPPFIATLAMLSVGRGLSLVISQGSPIAFPESVSHLGDNLGGWLPVPV
LVMLVLGGVTAVILGRTYIGRAMYAIGGNEEAARLSGLRVKRQKLVIYALSGLFAAAAGI
VLASRLSSAQPQAAQGYELDAIAAVVIGGASLAGGTGKASGTLIGALILAVLRNGLNLLS
VSAFWQQVVIGVVIALAVLLDTVRRKAGATPVAAGAGGSGDRRKQALTYVLAAVVAAAVV
GATSFLHGGSSAAKSEKIGLSLSTLNNPFFVQIRAGAQDEAKKLGVDLSVTDAQNDASQQ
ANQLQNFTSEGLGTIIVNPVDSDAVTPAAKAVNKADIPLVAVDRAVNGADTAALVASDNV
SGGELAAKSLAEKLGGKGEIVILQGQAGTSASRERGAGFAEGLKAYPGIKVLAKQPADWD
RTKGLDVMTNLLQANPDVDGVFAENDEMALGAIKALGSKAGKSVQVIGFDGTADGLKAVE
AGTLYASVAQQPAELGRIAVRNAVEAAKGEKVEKSVMVPVKVVTSKNVAEFSG
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgacacgctcaagagttcgacgggcgcgagtggcgcctcgggagcctcaggg
cttcgccgtctgctgctcgacaacggcgcgctgaccgcgctcatcgtcctggtcgtcgcg
atgtcggtgctgtccggcgacttcctgacggccgacaacctgctcaacatcggtgtccag
gccgccgtcaccgcgatcctcgcgttcggtgtgaccttcgtgatcgtctcggcgggcatc
gacctgtcggtgggttcggtggcggcgctgtcggccaccgtccttgcctggagcgccacg
tcggagggagtcccggtcccgatagccgtgctcctcgccgtcgtcacgggtatcgcgtgc
ggtctcgtcaacggcttcctgatctcgtacgggaagctgccgccgttcatcgcgacgctc
gccatgctgtcggtggggcgcggtctgtcgctggtgatctcgcagggcagcccgatcgcg
ttccccgagtcggtctcgcacctcggtgacaacctgggcggctggctgccggtgccggtc
ctggtgatgctggtcctcggcggcgtgacggccgtgatcctcgggcggacgtacatcggg
cgcgccatgtacgcgatcggcggcaacgaggaggcggcccggctgtccggcctgcgggtg
aagcggcagaagctcgtcatctacgcgctctccgggctgttcgccgccgccgcgggcatc
gtgctcgcctcccggctctcctccgcgcagccgcaggccgcgcagggctacgagctggac
gctatcgctgcggtcgtcatcggcggtgcctcgctggccggcggcacgggcaaggcgtcg
gggacgctgatcggcgcgctgatcctggcggtgctcaggaacggcctcaacctgctctcc
gtgtccgccttctggcagcaggtcgtcatcggtgtcgtcatcgcgctggcggtgctgctg
gacaccgtgcggcggaaggcgggggcgaccccggtggcggccggtgccggtggctccggg
gaccggcggaagcaggcgttgacgtacgtgctggccgcggtggtcgcggcggcggtcgtg
ggcgcgacctcgttcctgcacggcgggtcgtcggcggcgaagagcgagaagatcgggctg
tcgctgtcgacgctcaacaaccccttcttcgtgcagatccgggcgggcgcccaggacgag
gcgaagaagctgggcgtggacctgtcggtcacggacgcgcagaacgacgcctcgcagcag
gccaaccagctgcagaacttcaccagcgagggcctcggcacgatcatcgtcaacccggtg
gactccgacgcggtgaccccggcggccaaggccgtcaacaaggcggacattccgctggtg
gccgtcgaccgcgcggtgaacggcgcggacaccgccgcgctcgtcgcctccgacaacgtc
agcggcggcgagctcgccgccaagtcgctcgccgagaagctgggcggcaagggcgagatc
gtcatcctgcagggccaggcgggcacctccgccagccgggagcgcggcgccggcttcgcc
gaggggctgaaggcctacccgggcatcaaggtcctcgccaagcagcccgccgactgggac
cgcaccaagggcctcgacgtgatgacgaacctgctgcaggccaacccggacgtcgacggt
gtcttcgcggagaacgacgagatggcgctcggcgcgatcaaggcgctcggctccaaggcc
ggaaagtccgtccaggtcatcggcttcgacggtacggcggacgggctgaaggccgtcgag
gcgggcacgctgtacgcgtcggtcgcgcagcagccggcggaactcggcaggatcgcggtg
cgcaacgcggtcgaggccgccaagggcgagaaggtcgagaagtcggtgatggtgccggtg
aaggtggtcacgtcgaagaacgtggccgagttcagcggctga
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