Streptomyces deccanensis: L3078_16935
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Entry
L3078_16935 CDS
T08215
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sdec
Streptomyces deccanensis
Pathway
sdec03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
L3078_16935 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdec03019
]
L3078_16935 (orn)
03009 Ribosome biogenesis [BR:
sdec03009
]
L3078_16935 (orn)
Messenger RNA biogenesis [BR:
sdec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
L3078_16935 (orn)
Ribosome biogenesis [BR:
sdec03009
]
Eukaryotic type
Pre-60S particles
RNases
L3078_16935 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ULR50855
LinkDB
All DBs
Position
3807933..3808535
Genome browser
AA seq
200 aa
AA seq
DB search
MNDRMVWIDCEMTGLSLSDDALIEVAALVTDSELNVLGEGVDIVVRPPDSALETMPEVVR
EMHTASGLLDALAGGTTLADAEEQVLAYVREHVKEPRKAPLCGNSVGTDRGFLLRDMPTL
EEYLHYRIVDVSSIKELARRWYPRAYFNSPEKNGNHRALADIRESIVELRYYREAIFVPQ
PGPDSDTARTIAAKHVLPGR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgcatggtgtggatcgactgcgagatgaccggcctctcgctgtcggacgac
gcgctcatcgaggtggccgccctcgtcaccgactccgagctgaacgtgctcggcgaggga
gtcgacatcgtcgtccgcccgccggactcggcgctggagacgatgccggaggtggtgcgc
gagatgcacaccgcgtccggcctgctggacgccctggccggcggcacgacgctcgccgac
gccgaggagcaggtgctggcgtacgtacgggaacacgtgaaggaaccgcgcaaggctccg
ctgtgcggcaactcggtgggcacggaccggggcttcctcctgcgggacatgccgacgctg
gaggagtacctgcactaccgcatcgtggacgtctcctcgatcaaggagctggcgcggcgc
tggtacccgagggcgtacttcaacagcccggagaagaacggcaaccaccgggccctcgcc
gacatccgcgaatccatcgtcgaactccgctactaccgcgaggcgatcttcgtgccccag
cccggccccgactcggacacggcccgcacgatcgccgcgaagcacgtcctgcccggccgg
tag
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