Streptomyces deccanensis: L3078_17615
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Entry
L3078_17615 CDS
T08215
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
sdec
Streptomyces deccanensis
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdec03009
]
L3078_17615
Ribosome biogenesis [BR:
sdec03009
]
Prokaryotic type
ribosomal protein modification factors
L3078_17615
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Gene cluster
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
ULR56002
LinkDB
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Position
3950676..3952004
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AA seq
442 aa
AA seq
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MALLDGAAKDDVPPERETAVQQALSAVGDWLAAERLTADIRKYGIESAPTYEVRLTDAQG
ALCSRSSGKGLGHRSMASALFESAEHYHLDWRRDPRASEAEFLPGREIAGQATARRSALL
RRLGGIMPDAPVLTRTYRPVDEVLTGRAEGAPAGRPHRHPVFLRDGGYRNWPHPDDDRSF
QPLWHYTSSAGYAAGATPHEALVHAVNELIERDAWSYQLARSYFGLPSEGPELRVVDHDT
LPPELRELTGTVEEVRGAPVLIVDITCDTGVPAYVVCDARSREDVRLIGSGASPVRTYAL
QRALLEYLQVRTMFEHGPVDADTEAGQIATALARYPRHLAAARFDVGQLPHERREFDADD
GLPATASPEQLLRHLVDRLRDLGVDVHHRVLTPPGSVTVVDVVAPGLEMFDKARAGYPVL
PTGRLGERLRPRPREEHGGAPR
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
gtggccctgctggacggggccgccaaggacgacgttccgcctgagcgcgagacggccgtc
cagcaggccctgtccgccgtcggggactggctggccgcggagcggctcacggccgacatc
cgcaagtacggcatcgagtccgcgcccacgtacgaggtgcggctgacggacgcgcagggc
gcgctctgttcccgcagctccggcaaggggctcgggcaccggagcatggcgagcgcgctg
ttcgagagcgccgagcactaccacctggactggcgccgggatccacgggcgtcggaggcc
gagttcctgccggggcgggagatcgcggggcaggccaccgcccggcggtccgcgctgctg
cgccggctcggcggcatcatgccggacgcgcccgtgctgacccgtacgtaccggccggtg
gacgaggtgctcaccggacgggcggagggcgccccggccgggcggccgcaccggcatccc
gtgttcctgcgcgacggcggctaccgcaactggccccacccggacgacgaccggtcgttc
cagccgctgtggcactacacctccagcgccgggtacgcggcgggcgccaccccgcacgag
gcgctggtgcacgccgtcaacgagctgatcgagcgggacgcctggtcgtaccagctggcg
cggtcgtacttcggcctgcccagcgaggggcccgagctgcgggtggtcgaccacgacacg
ctgcccccggaactgcgggagctgaccggcacggtcgaggaggtccgtggggcgccggtg
ctgatcgtcgacatcacctgcgacaccggcgtaccggcctatgtggtgtgcgacgcgcgg
agccgggaggacgtgcggctgatcggcagcggggcctcgccggtgcggacgtacgcgctg
cagcgggcccttctcgaatacctccaggtgcgcacgatgttcgagcacgggccggtggac
gcggacaccgaggccgggcagatcgccaccgcgctggcccgctatccccgccatctcgcc
gccgcccgcttcgatgtcggccaactgccgcacgagcggagggagttcgacgcggacgac
ggactgcccgcgaccgcgagccccgaacagctgctgcggcacctcgtggaccggctgcgg
gacctgggcgtcgacgtccaccaccgggtgctgacgccgccggggtccgtcacggtcgtc
gacgtcgtcgcgccgggcctggagatgttcgacaaggcgcgggcgggctatccggtgctg
ccgaccgggcgcctcggcgaacggctgcggccgcggccgcgcgaggagcacggaggtgcg
ccccggtga
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