Streptomyces deccanensis: L3078_17965
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Entry
L3078_17965 CDS
T08215
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sdec
Streptomyces deccanensis
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdec03032
]
L3078_17965
03036 Chromosome and associated proteins [BR:
sdec03036
]
L3078_17965
03400 DNA repair and recombination proteins [BR:
sdec03400
]
L3078_17965
DNA replication proteins [BR:
sdec03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
L3078_17965
Chromosome and associated proteins [BR:
sdec03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
L3078_17965
DNA repair and recombination proteins [BR:
sdec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
L3078_17965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
Urease_beta
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
ULR51033
LinkDB
All DBs
Position
complement(4019857..4020138)
Genome browser
AA seq
93 aa
AA seq
DB search
MNRSELVAALADRAEVTRKDADAVLAAFAEVVGDIVAKGDEKVTIPGFLTFERTHRAART
ARNPQTGDPIQIPAGYSVKVSAGSKLKEAAKGK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcagtgagctggtggccgcgctggccgaccgtgccgaggtgacccgcaaggac
gccgacgccgtgctggccgcgttcgccgaggtcgtcggcgacatcgtcgccaagggcgac
gagaaggtcaccatccccggcttcctgaccttcgagcgcacccaccgtgccgctcgcacc
gctcgcaacccgcagaccggcgacccgatccagatccccgccggctacagcgtgaaggtc
tccgcgggcagcaagctcaaggaagcggcgaagggcaagtaa
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