Streptomyces deccanensis: L3078_18670
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Entry
L3078_18670 CDS
T08215
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sdec
Streptomyces deccanensis
Pathway
sdec00300
Lysine biosynthesis
sdec00470
D-Amino acid metabolism
sdec01100
Metabolic pathways
sdec01110
Biosynthesis of secondary metabolites
sdec01120
Microbial metabolism in diverse environments
sdec01230
Biosynthesis of amino acids
Module
sdec_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
L3078_18670
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
L3078_18670
Enzymes [BR:
sdec01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
L3078_18670
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ULR56015
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All DBs
Position
4204597..4206018
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AA seq
473 aa
AA seq
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MGDRTSGTGGERPGARQDEGDAERTLRLFDTDGERAARRDEAVRAAVEQGLLGPGEPVVA
LLDVTGIRASAGALRRAFDAVTAPGTPVLHAFAVKATPLVPVLRLLREAGIGAEVASAGE
LALARAAGVPPRLTVLDSPAKTSAELREALALGIAVNADNPQELDRIDALVRSATTRSPL
GIRVNPQVGGGAIDALSTATATSKFGVALRDEGAREWVVRAYLDRPWLSRLHAHTGSQGI
PLSLMTRGITETYELAEEINRRIGRRQIDTIDIGGGLPVNFASEAATPTYEQYARLLAEA
VPGLFDGRYGLVTEFGRSLLAKHGTVVARVEYTKSAGGRAIAVTHAGVQVATRTVYAPGS
WPLRIAAYDAKGRVKVGPTVTQDVAGPACFAGDLLAEGRALPLFEPGDYAAALDTGAYYF
AHHYAYNSLPRPGIYGYAPGERGMRFAVVRRAQTVEELVAEAGGAERAGLLGL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaggaccagcgggaccggcggggagaggcccggcgcccggcaggacgagggg
gacgccgagcgcacgttgcggctgttcgacaccgacggcgagcgggccgcgcggcgggac
gaggcggtgcgggcggcggtggagcaggggctgctgggtcccggcgagccggtcgtcgcg
ctgctcgacgtgaccgggatccgggcgtcggccggggcgctgcgcagggcgttcgacgcg
gtgacggcgccggggacgcccgtgctgcacgcgttcgcggtgaaggcgacgccgctggtg
cccgtgctgcggctgctgcgcgaggcggggatcggcgcggaggtggcgagtgccggggag
ctggccctggcgcgggcggccggggtgccgccgaggctgaccgtgctcgactcccccgcc
aagacgtcggccgagctgcgggaggcgctggcgctgggcatcgccgtcaacgcggacaat
ccgcaggagctggaccgcatcgacgcgctcgtccggtcggccaccacccgctcccccctc
ggcatccgggtgaacccgcaggtcggcggcggcgcgatcgacgcactgtccacggcgacg
gccacctcgaagttcggggtggcgctccgggacgagggcgcccgcgagtgggtcgtacgg
gcgtatctggaccggccctggctgagccggctgcacgcgcacaccgggtcgcaggggatc
ccgctgtcgctgatgacgcgggggatcacggagacgtacgagctggcggaggagatcaac
cggcggatcgggcggcggcagatcgacacgatcgacatcggcggcgggctgccggtgaac
ttcgcctcggaggcggcgacgccgacgtacgagcagtacgcgcggctgctggcggaggcg
gtgccggggctgttcgacgggcggtacgggctggtgaccgagttcgggcggtcgctgctg
gcgaagcacgggacggtcgtcgcgcgggtggagtacacgaagagcgcgggcggccgggcc
atcgcggtcacccacgccggggtgcaggtggcgacgcggacggtgtacgcgccggggtcg
tggccgctgcggatcgccgcgtacgacgcgaaggggcgggtgaaggtggggccgacggtg
acgcaggacgtggcggggcccgcctgtttcgccggggacctgctggcggaggggcgcgca
ctgccgctgttcgagcccggggactacgcggccgcgctggacaccggcgcgtactacttc
gcgcaccactacgcgtacaactccctgccccggcccgggatctacgggtacgcgcccggg
gagagggggatgcggttcgcggtggtgcggcgggcgcagaccgtggaggagctcgtggcg
gaggcggggggagccgagcgggcggggctgctggggctttga
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