Streptomyces deccanensis: L3078_19295
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Entry
L3078_19295 CDS
T08215
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sdec
Streptomyces deccanensis
Pathway
sdec03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L3078_19295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdec03400
]
L3078_19295
Enzymes [BR:
sdec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
L3078_19295
DNA repair and recombination proteins [BR:
sdec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
L3078_19295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
GspH
Motif
Other DBs
NCBI-ProteinID:
ULR51272
LinkDB
All DBs
Position
complement(4349415..4350218)
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AA seq
267 aa
AA seq
DB search
MLTVTSVNVNGLRAAAKKGFVEWLAGTSADVVCLQEVRAEPEQLPEGVRQPEGWHVVHAP
AAAKGRAGVSLYSRREPDSVRIGFGSAEFDGSGRYVEADLPGVTVASLYLPSGEVGTERQ
DEKVRFMDEFLAYLKELRERAAADGREVVVCGDWNIAHQPADLKNWRANQKNSGFLPEER
AWLGRVFDEADGAYVDVLRALHPDVEGPYTWWSYRGRAFDNDAGWRIDYQVATAGLAGKA
VKGFVERAATHAERWSDHAPVTVVYDL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgctgactgtgacctctgtgaatgtgaacgggctgcgggccgccgcgaagaagggcttc
gtggagtggctcgccgggacctcggcggacgtggtgtgcctccaggaggtgcgggccgaa
ccggaacagctccccgagggggtgcggcagcccgagggatggcacgtcgtgcacgccccg
gccgccgccaaggggcgcgcgggggtgtcgctctacagccgccgtgagcccgacagcgtc
cgcatcggcttcggatcggccgagttcgacggcagcggacggtacgtggaggccgatctg
cccggtgtcaccgtggccagcctctaccttccctccggcgaggtggggaccgagcggcag
gacgagaaggtccggttcatggacgagttcctcgcctatctgaaggagctgcgcgagcgt
gccgccgccgacgggcgcgaggtggtcgtctgcggcgactggaacatcgcccaccagccg
gccgacctcaagaactggcgcgcgaaccagaagaactccgggttcctgccggaggagcgg
gcgtggctggggcgggtgttcgacgaggcggacggggcgtacgtcgatgtactgcgcgcc
ctgcaccccgacgtcgaggggccctacacctggtggtcgtaccgggggcgggccttcgac
aacgatgcagggtggcgcatcgactaccaggtggccacggccgggctcgccggcaaggcg
gtcaagggcttcgtggagcgggccgcgacccatgcggagcgctggtcggaccacgcgccg
gtgacggtggtctacgacctctga
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