Streptomyces deccanensis: L3078_22320
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Entry
L3078_22320 CDS
T08215
Name
(GenBank) PAS domain-containing protein
Organism
sdec
Streptomyces deccanensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_4
PAS_8
Response_reg
PAS_7
HisKA
PAS_10
Motif
Other DBs
NCBI-ProteinID:
ULR51804
LinkDB
All DBs
Position
4998301..5003736
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AA seq
1811 aa
AA seq
DB search
MSSRPSRGAARLAAILDALPDALVLVNANGTVVNANTIALEAFEAPGTALVGRGLLDLLP
EFDSRLIPGSMRRPDTMDPTGRTKPTRMTARRTDGSEFPVEVTSANLENGQQAYDGYGYA
NDELLMLVVRDLSGTVDTEAELARSQRQTEMILRAASEGVVGTDTDGRIVLVNPAAAQIL
GYRASDLGGRELHTLVLHSREDGAPFPYTESPLADTLKSGRKHRVRGQVLWSKNGEKVSV
DLTTAPVRDGDQLVGAVMTFTDRRPYDKLAEEKDAEAETHAEELERLAKEHAEELAGVRE
EHAAELAELSEQHAEELAAGDERYAALGEREKDRYEALAARHEQLLAVLGTSLRGPLDQL
RSELGTLAADDAGQLWPEANQVLHHLTAGYSRITTLIDNVLGYQRIDAGEDDLVRTAVML
DAVVAAGVDGAVELVGPGRVQFAVHAPPIEAEVDQVRLATALAHLIADVAGVDATGNAPM
STGGYMDNTVVVAAAQRGEVVRIEVRGPYAGGDPVHQPIVQGIVRAHGGVLQTVEVPGMS
GSAYVLEVPLGGGAGAVPAAQLPAVTDAEVDPGAMATGAPATGAEVALPEQAPAGGGRRR
ARRSSVDAFLDSEDAPEAREGEAPVAPTGRRRRRAEDAAGAPGAAGPGEGAGPTQGAEAE
GAGGTGRRRGRAASAEQAGEGVATEGAVVTAAEHAAGAAAAATGLGGTVPPQGVPAPGGR
RARREPAAQNALPPALAAGPVPVPEATDAASASAEAGGAQQPTGRRRRALGGGEERAAAP
EPGARTVFALPPAEADRGPEYAEAAGLGPVPLPAAPGAPGAPMPMPLPAGTTGTAGPAQD
GEGYEGEGGQGAAAAAPPGVPAVGGPVPVGGQVPGGGPVPPGGVAPVGGPVPAAGVGQQF
TGVGQQLPQNGPGAPGGVAGPGAGQAADAGQMAGTGVAAGAGDAAGLGQVPGGGQVAASG
PVSGAPAGGGDDGRHDAALHNPGDDHTPPQPHPVPTPTGRRRAVRQPAPQQGEGAGAMAP
GQQAPAQAAAASTAAAAQGIPPQGGPGQPVPVQGAPMAAAQPVSAQGVPGGPQAVPAQGV
PGGPQPVPGQAGGVAPGQPVPAGIAAAQSVAPQGVPGGAAQAAAGQALPGQALPGQALPG
QPATGQAATGQPLAAQAAVAQHAPGQPAVGQPGAVQGVVPPQGAPGGRQQVPAQAGALGH
SVLVPGAQGVPGLQAVPGAQGAQPVPGLGQPAPAVGMPAAGMPGVQQPAPAQAAGPGVAQ
PQQQPQSWPDPRHETSGAGIPVAAPQAPLPPQSTPSSGTPLPPEVAVQQQPRAAQPLPAE
AAPPVQAAAQAQAQVQARAQAQAAQAPPAPAPAPAPAPVDPNSTQGRSISVRTLGQGVPF
SRQGGPQVQVPQAQGQAQAQAAQPGVQAAAQTQAQPQAGSTPAPNQPGGSGRRRKLGTPP
QPTGDRPETAARPHPQSTPTNGTGLRLGTGQTPPPGQAPAQPQTAAQVSQPSLAGQVPLP
AQPSLAGQVPLPPQPSVAGQSRLAGRTEGAGRSYAIGAPDENADEGPEPLDGPGGAVEVP
DRPHPQPMDDELPPEPLDNPRRLLVWPAPDVTTHQALSDRGYRPVIVNSREDVDAQIAAY
PAALFVDPLTGPITRTALQSLRQAAVAAEVPVLVTAGLGQATREAAYGADPAILLKALAP
RDSEQHPPRVLLIEEHAEIALALTATLERRGMQVARAASDADAVTLAAQMRPNLVVMDLL
QVHRRQAGIIDWLRANGQLNRTPLVVYTAAVDQSELPRLASGETVLFLAERSTSPEVQTR
IVDLLARVGTN
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcaggccatcccgaggcgctgctcgcctcgcagccatactggacgcgctgccc
gatgcgttggtgctggtcaacgccaatgggaccgtcgtcaacgccaacacgatcgcgctg
gaggccttcgaggccccggggaccgccctcgtggggcgcggtctgctcgatctgctgccc
gagttcgactcccggctcatcccgggctccatgcggcggcccgacaccatggacccgacg
ggccggaccaagccgacccggatgaccgcccgccggaccgacggcagcgagttcccggtc
gaggtcacaagcgcgaatctggagaacggccagcaggcgtacgacggttacggctacgcc
aatgacgagctgctcatgctggtcgtacgggatctttcgggcaccgtcgacaccgaggcc
gaactcgcgcgttcgcaacggcagacggagatgatcctgcgggccgcctccgagggggtc
gtcgggaccgacaccgacggacggatcgttctggtcaatccggcggccgcccagatactg
ggttatcgggccagtgacctcggcggacgcgagctgcacacgctggtgctgcactcccgc
gaggacggcgcccccttcccgtacaccgagtcgccgctcgcggacaccctgaagtccggg
cgcaagcaccgggtgcgcgggcaggtgttgtggtcgaagaacggcgagaaggtgtcggtc
gacctgacgaccgcgccggtacgcgacggcgatcagctcgtcggcgccgtgatgacgttc
accgaccggcggccctacgacaagctcgccgaggagaaggacgccgaggccgagacgcac
gcggaggagctggagcggctcgccaaggagcacgccgaggaactcgcgggcgtgcgcgag
gagcacgcggccgagctggccgagctcagcgagcagcacgccgaggaactcgccgccggg
gacgagcggtacgcggcgctcggggagcgcgagaaggaccgctacgaggcgctggccgcg
cggcacgagcagttgctcgccgtgctcggcacctcgctgcgcggcccgctcgaccagctc
cgcagcgagctgggcaccctcgccgccgacgacgccgggcagctgtggcccgaggcgaac
caggtgctccaccatctgaccgccgggtattcgcggatcacgaccctcatcgacaacgtg
ctcggctaccagcggatcgacgcgggcgaggacgacctcgtgcgtacggccgtgatgctc
gacgcggtcgtcgcggccggtgtcgacggggccgtggagctggtcgggccggggcgggtg
cagttcgccgtgcacgcgccgcccatcgaggccgaggtggaccaggtgcggctcgcgacc
gccctcgcccacctcatcgctgatgtcgccggcgtcgacgcgacgggcaacgcgcccatg
tccaccggcggctacatggacaacacggtcgtcgtggccgccgcgcagcgcggcgaggtc
gtgcggatcgaggtgcgcgggccgtacgccgggggagacccggtgcatcagccgatcgtc
caggggatcgtgcgggcgcacggcggtgtcctccagacggtcgaggtgccgggcatgagc
ggcagcgcgtatgtactggaggtgccgctcggcggtggtgccggcgcggtgcccgccgct
cagctgcccgccgtgacggatgccgaggtcgatcccggggcgatggccaccggtgccccg
gccaccggtgccgaggtcgcgctgcccgagcaggcccccgccggtggtgggcggcggcgg
gcgcggcgttcgtcggtggacgcgttcctggacagcgaggacgctcccgaggcccgggag
ggcgaggcccctgtcgccccgaccggacggcgtcgccgccgggcggaggacgcggcgggt
gcgccgggcgcggccggccccggtgagggcgccgggcccacacagggcgccgaggccgag
ggcgccgggggcaccgggcggcgacgtggacgtgccgcctcggccgagcaggccggtgag
ggtgtggccaccgaaggtgccgtcgtcacggcggccgagcacgcggcgggtgccgctgcc
gccgccaccgggctgggcggaaccgtgccgccgcagggtgtgcccgcccccggtggacgg
cgcgcgcgccgggagcccgccgcgcagaacgcgttgccgccggccctggccgcggggccg
gtcccggtccccgaggcgaccgacgccgcctccgcctccgccgaggcaggcggtgcccag
cagcccaccggccgccgtcgtcgcgccctcgggggtggcgaggagcgtgccgccgcgccc
gagccgggtgcgcgaaccgtcttcgccctgccaccggccgaggccgaccggggcccggag
tacgcggaggccgccggcctcggcccggtcccgctgcccgcggcgccgggtgcccccggc
gcgcccatgccgatgcccctgcccgccggaaccaccggaacggccgggcccgcgcaggac
ggggaggggtacgaaggcgagggcggccagggtgcagccgccgctgccccgcccggggtt
cctgccgtcggcggaccggtgccggtgggagggcaggttcccgggggtgggcccgtgcct
cccgggggagtcgcgcccgtcggggggccggtgcccgccgctggtgtcgggcagcagttc
accggtgtgggacagcagcttccccagaacggtccgggggcgccgggtggcgtcgcgggg
ccgggtgcggggcaggccgccgacgcggggcagatggctgggaccggtgtggcggccggt
gccggtgacgccgccggtctcgggcaggtgcccggcggtggccaagtggccgcctcgggg
ccggtgtcgggtgccccggccggtggtggcgacgacggtcgccatgacgccgcgctccac
aaccccggcgacgaccacaccccgccgcagccgcacccggtgcccacgcccacgggccgc
cgccgggcggtacggcagcccgccccccagcagggcgagggcgcgggcgcgatggcaccc
ggacagcaggctccggcccaggccgctgccgcttccactgccgccgccgctcaaggcatc
cccccgcagggaggacccgggcagccggttcccgtccagggcgcgccgatggccgccgcg
cagcccgtctccgcccagggcgtcccgggtggcccgcaggccgtgcccgcacagggggtc
cccggcggaccgcagccagtgcccggccaggccggtggggtggctccgggtcagcccgtc
ccggcggggatcgcggccgcgcagtccgtcgctccgcaaggggtaccgggcggcgccgct
caggcagccgccggacaagccctgcctggacaagcccttcccggacaggccctccccggg
cagccggcgaccgggcaagcggccaccgggcagcctctcgccgcacaggccgctgtcgcc
cagcacgccccggggcagcccgccgtcggacaacccggtgccgtgcagggagtcgtcccg
ccgcaaggggcacccggtggccgacagcaggtgcccgcgcaggccggagccctcgggcac
tccgtcctcgtaccgggagcgcagggcgtaccggggctccaggccgtcccgggggcgcag
ggcgcgcagccggtcccgggcctcggccagcccgcgcccgccgtagggatgcccgcggca
gggatgcccggcgtccagcagcccgcccccgctcaggccgccggccccggcgtggcccag
ccgcaacagcagccgcagtcctggcccgacccccgccacgagacctccggcgccggtatc
cccgtagccgctccccaggcaccgctgcctccacagtccactccgtcctcgggcacgccg
ctgccgccggaggtcgcggtccagcagcagccgcgcgccgcacagccgttgccggccgaa
gcagcgccgccggtccaggccgcggcccaagcccaagcccaggttcaggcacgggctcaa
gctcaggccgctcaggcgccccccgcacccgcacccgcccccgcccccgctcccgtcgac
cccaactccacccagggccggtcgatcagcgtgcggacgctgggccagggggtccccttc
tcccgccaaggcggtccccaggtccaggtccctcaggcccaggggcaggcacaggcacag
gcggcacagcccggcgtacaggccgccgcgcagacgcaggcgcagccccaggccgggtcc
acgcccgccccgaaccagcccggcggctccggcaggcgccgcaagctggggacaccgccc
caacccaccggtgaccgccccgagacggccgcgcgcccccacccgcagtccaccccgacc
aacggcacgggccttcgcctcggtaccggacagaccccgccccccggccaggccccggcc
cagccgcagacggccgcgcaggtgtcgcagccctcgctcgccggccaggtcccgctcccg
gcgcagccttcgctcgcgggccaggtcccgctcccgccgcagccgtccgtcgccgggcag
tcccggctggcgggccgtacggagggtgccgggcggtcgtacgccataggggcgcccgac
gagaacgcggacgaaggtcccgaaccgctcgacgggcccggcggcgcggtggaggtcccc
gatcggccgcatccgcagccgatggacgacgagttgccgccggagccgctcgacaacccg
cgtcggctgctggtgtggcccgcgccggacgtgacgacccaccaggcgctgagcgaccgc
ggctaccggcccgtcatcgtgaactcccgcgaggacgtggacgcccagatcgccgcgtac
ccggccgctctcttcgtcgacccgctgaccggccccatcacccgcacggcactgcagtcg
ctgcgccaggccgccgtggccgccgaagtccccgtcctcgtcacggcgggcctcggtcag
gcgacacgtgaggcggcgtacggggccgacccggcgatcctgttgaaggcgctcgcgccg
cgcgactccgagcagcacccgccgcgtgtcctgctcatcgaggagcacgcggagatcgcg
ctcgccctgaccgcgacgctggaacgccgtggcatgcaggtcgcgcgggcggcgtcggac
gcggacgccgtcaccctcgccgcgcagatgcggcccaacctcgtggtgatggacctgctc
caggtgcaccgccgccaggccgggatcatcgactggctacgggcgaacggccagttgaac
cgcaccccgctcgtcgtctacaccgccgccgtcgaccagtccgaactcccgcgcctggcc
tcgggagagacggtcctcttcctcgcggaacgctcgacgagccccgaggtccagacccga
atcgtggacctgctggcacgagtaggtacgaactga
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