KEGG   Streptomyces deccanensis: L3078_28280
Entry
L3078_28280       CDS       T08215                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
sdec  Streptomyces deccanensis
Pathway
sdec03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sdec00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    L3078_28280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sdec03021]
    L3078_28280
   03400 DNA repair and recombination proteins [BR:sdec03400]
    L3078_28280
Enzymes [BR:sdec01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     L3078_28280
Transcription machinery [BR:sdec03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     L3078_28280
DNA repair and recombination proteins [BR:sdec03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      L3078_28280
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 SAM_EPH
Other DBs
NCBI-ProteinID: ULR52860
LinkDB
Position
6320833..6321855
AA seq 340 aa
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRVDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgctgatcgctcagcgtccctcgttgaccgaagaggtcgtcgacgagttccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactccctgcgtcgt
acgctcctgtcgtcgatccccggtgcggctgtcaccagcatccgggtcgacggtgtcctg
cacgagttcaccaccgtgccgggtgtcaaggaggacgtcaccgacctgatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggtccgggtctggtcaccgccgccgacatcgcgccgccggccggtgtcgaggtgcacaac
cccgacctggtcctggccacgctcaacggcaagggcaagctggagatggagctgacggtc
gagcgtggccgcggttatgtctccgccgtgcagaacaagcaggtgggccaggagatcggg
cgtatcccggtcgactcgatctactcgccggtgctgaaggtcacgtacaaggtcgaggcc
acgcgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gcgatgcgtccgcgtgacgccatggcgtcggccggtaagaccctggtcgagctgttcggt
ctcgcccgcgagctgaacatcgacgccgagggcatcgacatgggcccgtcccccacggac
gccgccctcgccgccgacctggcgctgccgatcgaggagctggagctcaccgttcggtcg
tacaactgcctcaagcgtgagggcatccactccgtgggtgagctggtcgcgcgctccgag
gcggacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggcatgggtctggcgctcaaggactcgcctcccgggttcgaccccaccgctgcg
gcggacgcgttcggcgcggacgacgacgcggacgcgggcttcgtggagaccgagcagtac
taa

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