Streptomyces deccanensis: L3078_29985
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Entry
L3078_29985 CDS
T08215
Name
(GenBank) fumarate reductase/succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
sdec
Streptomyces deccanensis
Pathway
sdec00020
Citrate cycle (TCA cycle)
sdec00190
Oxidative phosphorylation
sdec00650
Butanoate metabolism
sdec00720
Other carbon fixation pathways
sdec01100
Metabolic pathways
sdec01110
Biosynthesis of secondary metabolites
sdec01120
Microbial metabolism in diverse environments
sdec01200
Carbon metabolism
Module
sdec_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sdec_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sdec_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
L3078_29985
00650 Butanoate metabolism
L3078_29985
09102 Energy metabolism
00190 Oxidative phosphorylation
L3078_29985
00720 Other carbon fixation pathways
L3078_29985
Enzymes [BR:
sdec01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
L3078_29985
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
FAD_oxidored
Pyr_redox_2
GIDA
Thi4
FAD_binding_3
Pyr_redox_3
NAD_binding_8
AlaDh_PNT_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
ULR53166
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Position
complement(6721729..6723669)
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AA seq
646 aa
AA seq
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MSVVERQEWDVVVIGAGGAGLRAAIEARERGARTAVICKSLFGKAHTVMAEGGIAAAMGN
VNSGDNWQVHFRDTMRGGKFLNQWRMAELHAKEAPDRVWELETWGALFDRTKDGRISQRN
FGGHEYPRLAHVGDRTGLELIRTLQQKIVALQQEDHKETGDYESRLKVFQECTVTRVLKD
GDRVSGAFAYERESGRFFVLEAPAVVIATGGIGKSFKVTSNSWEYTGDGHALALLAGAPL
LNMEFVQFHPTGMVWPPSVKGILVTESVRGDGGVLRNSENKRFMFDYIPDVFKEKYAESE
EEGDRWYEDPDHNRRPPELLPRDEVARAINAEVKAGRGSPHGGVFLDVSTRMPAETIRRR
LPSMYHQFKELADVDITAEAMEVGPTCHYVMGGIAVESDTAAARGVPGLFAAGEVAGGMH
GSNRLGGNSLSDLLVFGRRAGLHAAEYAAGLAGARPPVDDIEVDTAAAEALRPFSAEGPA
PGEAAAAGSRPPENPYTLHQELQQAMNDLVGIIRREGEMEQALERLADLRVRARRAGVEG
HRQFNPGWHLALDLRNMLLVSECVARAALERTESRGGHTREDHPTMDRDWRRINLLCRLT
DPAAGDSVVGPIALTRETTEAIRPDLLALFDKEELVKYLAEEELYE
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggtcgaacgacaggagtgggacgtcgtcgtgatcggcgccggcggcgccgga
ctgcgcgccgcgatcgaggcccgcgagcggggcgcccgtacggccgtgatctgcaagtcc
ctgttcggcaaggcccacacggtgatggccgagggcggcatcgcggccgccatgggcaac
gtcaactccggtgacaactggcaggtccacttccgcgacaccatgcgcggcggcaagttc
ctcaaccagtggcggatggccgagctgcacgccaaggaggctcccgaccgggtctgggag
ctggagacctggggcgccctcttcgaccgtacgaaggacggccgcatctcgcagcgcaac
ttcggcggccacgagtacccgcgcctcgcccacgtcggcgaccgtacgggcctggagctg
atccgcaccctccagcagaagatcgtcgcgctccagcaggaggaccacaaggagaccggt
gactacgagtcccggctgaaggtcttccaggagtgcacggtcacccgggtgctgaaggac
ggcgaccgggtgtccggggcgttcgcgtacgagcgcgagtcgggccggttcttcgtcctg
gaagctcccgccgtcgtcatcgcgaccggcggcatcggcaagtcgttcaaggtgacctcg
aactcgtgggagtacacgggtgacgggcacgcgctggcgctgctcgccggtgcgccgctg
ctgaacatggagttcgtgcagttccatccgacgggcatggtctggccgccgtcggtgaag
ggcatcctcgtcacggagtcggtgcgcggcgacggcggggtgctcaggaactccgagaac
aagcggttcatgttcgactacatcccggatgtcttcaaggagaagtacgcggagtccgag
gaggagggcgaccgctggtacgaggacccggaccacaaccggcgcccgcccgagctgctg
ccgcgcgacgaggtggcgcgggccatcaacgccgaggtgaaggcgggccggggctcgccg
cacggcggggtcttcctggacgtgtcgacccgcatgccggcggagaccatccggcgccga
ctgccgtccatgtaccaccagttcaaggagctggcggacgtcgacatcacggcggaggcg
atggaggtcgggccgacctgccactacgtgatgggcgggatcgcggtcgagtcggacacg
gccgccgcacgcggggtgccgggcctgttcgcggccggtgaggtggccggcgggatgcac
ggctccaaccggctgggcggcaactccctctccgacctgctggtcttcggccgccgggcg
ggcctgcacgcggccgagtacgcggcgggcctggccggtgcacgccctccggtggacgac
atcgaggtcgacacggccgccgccgaggcgctgcgtccgttctccgccgagggcccggcg
cccggggaggccgcggcggcggggagccggccgccggagaacccgtacaccctccaccag
gaactccagcaggccatgaacgacctggtcggcatcatccgccgcgagggcgagatggaa
caggcgctggagaggctcgccgatctgcgggtgcgggcgcgccgggcgggggtcgagggg
caccggcagttcaaccccggctggcacctcgccctggacctgcggaacatgctgctggtc
agcgagtgtgtggcgagggcggcgctggagcgcacggagtcccgtggcggccacacccgc
gaggaccatccgacgatggaccgcgactggcgccggatcaacctgctctgccggctcacc
gatccggcggccggcgacagcgtggtcggcccgatcgccctcacccgggagaccaccgaa
gccatccgtcccgacctgctcgccctcttcgacaaggaggagctggtcaagtacctcgcc
gaagaggagctgtacgagtga
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