KEGG   Streptomyces deccanensis: L3078_31070
Entry
L3078_31070       CDS       T08215                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
sdec  Streptomyces deccanensis
Pathway
sdec03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sdec00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    L3078_31070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdec03400]
    L3078_31070
DNA repair and recombination proteins [BR:sdec03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     L3078_31070
SSDB
Motif
Pfam: Ku YebG
Other DBs
NCBI-ProteinID: ULR53363
LinkDB
Position
6959449..6960537
AA seq 362 aa
MLPVRSIWNGAISFGLVSIPIKLVNATESHSVSFRQVHLEDGGRIRYRKVCELEDREVTQ
GEIGKAYEDADGTMIPITDEDLASLPIPTAKTIEIEGFVPAENVDPLQVDAAYYLAANGV
PAAKPYTLLREALKRSGKVAICKFALRGRERLGMLRVVDDVLAMHGLLWPDEIRTTEGVA
PDASVTVRDKELDLADALMDTLGEVDLESLHDDYREAVEEMIAAKASGEEPPSVPMPAAE
GKVLDLMAALEKSVREAKESRGEDADADVTHLASRPTPKGAPGKKSTASTRKTAAAPKKS
TSTTSAQPAKKAATKKQTPPRKTATTTKSTTTKSTASAKSSTAKTPAKKTPAKKTTTRKR
SA
NT seq 1089 nt   +upstreamnt  +downstreamnt
gtgctgcccgtgcgatccatctggaacggcgccatctccttcggcctggtcagcatcccg
atcaagctggtgaacgcgaccgagagccactccgtctccttccgccaggtccacctggag
gacggcggccgcatccgttaccgcaaggtctgcgagctggaggaccgggaggtgacgcag
ggggagatcggcaaggcgtacgaggacgcggacggcacgatgatcccgatcacggacgag
gacctcgcgtcgctgcccatccccacggccaagacgatcgagatcgagggcttcgtaccg
gccgagaacgtcgacccgctccaggtggacgccgcgtactacctcgcggcgaacggggtc
cccgcggccaagccgtacaccctcctccgcgaggcgctcaagcgcagcggaaaggtcgcc
atctgcaagttcgcgctccgggggcgcgagcggctggggatgctccgggtggtggacgac
gtgctggccatgcacggtctgctctggcccgacgagatccgtacgaccgagggggtcgcc
cccgatgcgagcgtcaccgtccgcgacaaggaactcgacctggcggacgccctcatggac
acgctcggggaggtcgacctggagtccctccacgacgactaccgcgaggcggtcgaggaa
atgatcgcggcgaaggcctccggcgaggagccgccgagcgttccgatgccggccgcggag
ggcaaggtgctcgacctcatggccgcgctggagaagagcgtgcgcgaggccaaggagtcg
cggggcgaggacgccgacgccgacgtcacccacctcgcgtcccggcccacgcccaaaggg
gcgcccggcaagaagtccaccgcctcaaccaggaagacggccgccgcgcccaagaagtcg
acgtccacgacctcggcacagccggcgaagaaggcggcgacgaagaagcagacgccgccc
agaaagacggcgacgacgacgaaatcgacgaccacgaaatccacggcgtcggcgaagtcg
tcgacggcgaagaccccggcgaagaaaaccccggcaaagaaaacaaccacccgcaaacgc
tcggcgtga

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