Streptomyces deccanensis: L3078_32105
Help
Entry
L3078_32105 CDS
T08215
Name
(GenBank) ABC transporter permease subunit
KO
K02033
peptide/nickel transport system permease protein
K02034
peptide/nickel transport system permease protein
Organism
sdec
Streptomyces deccanensis
Pathway
sdec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L3078_32105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdec02000
]
L3078_32105
Transporters [BR:
sdec02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
L3078_32105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ULR56197
LinkDB
All DBs
Position
complement(7211797..7213581)
Genome browser
AA seq
594 aa
AA seq
DB search
MVGATGLTRLLCLLAALTAVGLLPWLSGRDPALTVLRARSAEQEATPEALAAIREDLGLG
AGPLSLLGRWAAGLLRGDLGTSWVSGTDVLPSVVSGLQVSLGLMGTAFAVALLLACALVA
PVLLRGRGSAGAFAAMLAAVPEFLLATVALLVCGVWLGWLPTSGWAGPEYLVLPAIALGV
PAGGLLGRLVADALPAVLDERWVELWRGAGVSRARVSAAALRRVLPPLVPQFGMAAVGLT
GGAVAVEMVFAVPGIGRTALGAAKSQDIPLLQGAVLALLALGLVAGALATLARRRLLGPA
LRDAGLTLPPARPVRVHPAIPLTLAAVLLVTVGWGLLRDPYAVDTTARLFPPSWAHPLGT
DGLGRDVLARLGHGAATTVGTAAAVCALSLLVSLALGFLPRVAAGAADIANALPPVIVGI
LVAAVAGPGTGGAALAVALISWPALSAHAAALVQEVRASAFLTAQRAIGASPWWILTRHV
LPSVAAPVARHAVLRLPGIALALASLGFLGLGAQPPTPEWGLLLDESRAYVERAPWAALA
PAVALALLAGLAVSGAAYAQSRTARPTRKPGRAHRAKGSTSVEVTAEVRRATEV
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
ctggtcggggccaccgggctgacccgcctcctctgtctcctcgccgcgctgaccgccgtc
ggtctgctgccgtggctgtccggccgtgaccccgcgctgaccgtgctgcgcgcccggtcg
gccgagcaggaggcgacgcccgaggcgctggccgcgatccgcgaggacctgggcctcggc
gcgggccccctttccctgttggggcgttgggccgccggactgctgcgcggcgacctcggc
acgtcatgggtgtcgggcacggacgtcctgccctcggtggtctccggcctccaggtctcc
ctcggcctgatgggcaccgccttcgccgtcgccctcctgctggcctgcgcactggtcgcc
ccggtgctcctgcggggccgggggtcggccggcgcgttcgccgcgatgctcgccgccgtc
cccgagttcctgctggccacggtggcgctgctggtctgcggggtctggctgggctggctg
cccacgtcaggctgggcgggcccggagtacctcgtgctgcccgcgatcgccctcggtgtc
ccggccggcggtctgctgggccgcctggtcgcggacgcgctgcccgccgtgctcgacgaa
cgctgggtggagctgtggcgcggcgcgggcgtgagccgggcccgggtctcggcggccgcg
ctgcgccgcgtactgccgcccctggtaccgcagttcggcatggccgccgtcggcctgacc
ggcggcgcggtcgccgtggagatggtgttcgcggtgcccggcatcggccgtaccgcactg
ggcgcggccaagtcccaggacatccccctcctccagggcgcggtcctcgccctcctcgcc
ctgggcctggtcgcgggcgccctggccaccctcgcccggcggcggctcctcggcccggcc
ctgcgcgacgcgggcctcaccctgccgccggcccgcccggtccgcgtccaccccgcgatc
ccgctgaccctggcggccgtcctcctggtcaccgtgggctggggtctgctgcgcgacccg
tacgccgtggacaccaccgcccgtctcttcccgccgtcctgggcgcacccgctcggcacg
gacgggctcggccgtgacgtcctggcccgcctcggccacggtgcggccaccacggtcggc
acggcggcggcggtctgcgccctgagcctcctcgtctccctggccctcggcttcctgccc
cgggtcgcggcgggcgcggcggacatcgccaacgcgctgcctccggtgatcgtcggcatc
ctcgtcgccgcggtggccggccccggcacgggcggcgcggccctcgccgtggccctgatc
tcctggcccgccctgtccgcgcacgcggcggcgctggtgcaggaggtccgcgcgtccgcg
ttcctgaccgcccagcgggcgatcggcgcgagcccgtggtggatcctcacccggcacgtc
ctcccgtcggtcgccgcccccgtcgcccggcacgccgtcctgcgcctcccgggcatcgcc
ctggccctcgcctccctcggcttcctgggcctcggagcccaaccacccaccccggagtgg
gggttgctcctcgacgagtcacgtgcctacgtcgaacgcgcgccgtgggcggccctggca
ccggcggtcgccctggccctgctggcgggcctcgcggtgtcgggggcggcgtacgcgcaa
tcacggacggcccgccccacgcggaaacccggtcgggcccacagggcgaaggggagcaca
tccgttgaagtcacagcagaggtccgacgtgccaccgaagtctga
DBGET
integrated database retrieval system
