Streptomyces deccanensis: L3078_32560
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Entry
L3078_32560 CDS
T08215
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
sdec
Streptomyces deccanensis
Pathway
sdec02020
Two-component system
sdec02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L3078_32560 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L3078_32560 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdec03021
]
L3078_32560 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sdec02035
]
L3078_32560 (whiG)
Transcription machinery [BR:
sdec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L3078_32560 (whiG)
Bacterial motility proteins [BR:
sdec02035
]
Flagellar system
Flagellar assembly proteins
Stator
L3078_32560 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_31
UPF0122
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ULR53633
LinkDB
All DBs
Position
7311537..7312373
Genome browser
AA seq
278 aa
AA seq
DB search
MPQHTSGSDRAAVPTAARGTVRPPAPSTLDELWRTYKTTGDDRLREQLILHYSPLVKYVA
GRVSVGLPTNVEQADFVSSGVFGLIDAIEKFDIDREIKFETYAITRIRGAMIDELRALDW
IPRSVRQKARNVERAYATLESRLRRTPSEGEVAAEMGIAVDELHAVFSQLSLANVVALEE
LLHVGGEGGDRLSLMDTLEDTAADNPVEVAEDRELRRFLARAINTLPEREKTVVTLYYYE
GLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLASFGR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggtctgaccgggcggcggtacccaccgccgctcgcggcacc
gtgcgcccacccgccccctcgacactcgacgagctgtggcggacgtacaagacgacgggc
gacgaccggctgcgcgagcagctgatcctgcactattcaccgctggtgaagtacgtggcg
ggccgggtgagcgtcggcctgccgaccaacgtcgagcaggcggacttcgtctcctccggg
gtcttcgggctcatcgacgcgatcgagaagttcgacatcgaccgggagatcaagttcgag
acgtacgcgatcacccggatccggggcgccatgatcgacgaactgcgcgcgctggactgg
atcccccggtcggtgcggcagaaggcccgcaacgtcgagcgggcctacgccacgctggag
tcgcggctcagacgcaccccgagcgagggtgaggtcgccgccgagatgggtatcgcggtc
gacgaactccacgcggtcttcagccagttgtcactggccaacgtggtggcgctggaggag
ctgctgcatgtcgggggcgagggcggcgaccgtctgagcctgatggacacgctggaggac
accgccgcggacaacccggtcgaggtcgccgaggaccgggagctgcgccgcttcctggcg
cgggccatcaacacgctgcccgagcgggagaagaccgtcgtcacgctctactactacgag
gggctcaccctcgcggagatcgggaacgtgctgggggtcaccgagagccgggtgagccag
atccatacgaagtcggtgctgcagctgcgggcgaagctggcgagtttcggccgttga
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