Streptomyces deccanensis: L3078_32970
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Entry
L3078_32970 CDS
T08215
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sdec
Streptomyces deccanensis
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdec03016
]
L3078_32970 (truB)
Enzymes [BR:
sdec01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
L3078_32970 (truB)
Transfer RNA biogenesis [BR:
sdec03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
L3078_32970 (truB)
Prokaryotic type
L3078_32970 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ULR53708
LinkDB
All DBs
Position
7412151..7413062
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AA seq
303 aa
AA seq
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MTQQRQNTTPDGLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVEK
ATKLLGHLALTEKEYLGTIRLGQTTVTDDAEGEITASVDASKVTRDAVDAGVAELTGRIM
QVPSKVSAIKIDGVRSYKRARDGEDFEIPARPVTISSFAVYDVREGVAEDGTPVLDLVVS
VVCSSGTYIRALARDLGAGLGVGGHLTALRRTRVGPYKLDSARTLDQLQEELTVMPVADA
AAAAFPRWDVDDKRARLLLNGVRLDMPEEYTDQGATAVFDPTGRFLALVESHKGKAKSLA
VFG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcagcgccagaacaccacgcccgacggccttgtcatcgtcgacaagccgtcg
ggcttcacttcgcacgatgtcgtcgccaagatgcggggcatcgcccggacccggcgggtc
gggcacgcggggacgctcgacccgatggccaccggcgtgctcgtcctgggggtggagaag
gcgaccaagctcctcggtcacctcgcgctcacggagaaggagtacctcggcaccatccgg
ctcgggcagacgacggtcaccgacgacgccgagggcgagatcacggcgtcggtcgacgcg
tcgaaggtcacccgggacgcggtcgacgccggtgtggccgagctgaccggccggatcatg
caggtgccgtccaaggtcagcgccatcaagatcgacggcgtgcggtcgtacaaacgggcc
cgcgacggcgaggacttcgagatccccgcccggcccgtgaccatctcctccttcgccgtg
tacgacgtccgcgagggcgtcgccgaggacggcacccccgttctcgacctggtggtgtcg
gtggtgtgctcctccgggacgtacatccgggccctcgcccgtgatctgggcgcgggcctc
ggagtcggcggccacctcacggcgctgcgccgcacgcgcgtcggcccctacaagctggac
tccgcgcggaccctcgaccagctccaggaggagttgaccgtcatgccggtcgccgacgcc
gccgcggccgcgttcccccgctgggacgtggatgacaagcgcgctcggctcctgctgaac
ggagtccgcctggacatgccggaggagtacacggaccagggtgccaccgccgtcttcgac
cccacgggccgcttcctggccctggtcgaaagccacaagggcaaggcgaagagcctggcc
gtcttcggctga
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