Streptomyces deccanensis: L3078_33160
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Entry
L3078_33160 CDS
T08215
Name
(GenBank) HAMP domain-containing protein
Organism
sdec
Streptomyces deccanensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
Baculo_PEP_C
DUF4795
RNase_Y_N
ATG14
OmpH
Motif
Other DBs
NCBI-ProteinID:
ULR53736
LinkDB
All DBs
Position
7466544..7472045
Genome browser
AA seq
1833 aa
AA seq
DB search
MESGAATRGTKARAKGGQSLSDQRKSRKPRNGTTTVDTAALNRLLTALEAMRDGNFRKRL
TVSGDGVMAEIAAVFNEVADRNLHLTGELSRVRRVVGREGKLTERLETGATEGSWAAAID
ASNALVDDLVRPVSEVSRVLSAVADGDLSPRMELRTQAPDGTGHPLRGEFLKVGRTVNNL
VDQLSTFTDEVTRVASEVGTEGKLGGQAKVRGMSGSWKDLTESVNTMAYRLTAQVRDIAL
VTTAVAKGDLSRKVTVHVAGEMLELKETVNTMVDQLSAFSSEVTRVAREVGTEGQLGGQA
EVPGVAGVWKELTDSVNTMAGNLTLQMRGIAQVTTAVANGDLSQKVTVPARGEVAKLAET
INQMTETLRIFADEVTRVANEVGAEGRLGGQAQVPGAAGTWKDLTDSVNTVFRNLTIQVR
DIAAVTTAVANGDLSQKVTVDVAGEMLELKNTVNGMVDQLSYFGAEVTRVANEVGAEGRL
GGQAQVPGAAGTWKDLTDSVNTAFRNLTGQVRNIAAVTTAVANGDLSQKVTVDVAGEMLE
LKNTVNTMVDQLSSFADQVTRMARDVGTEGRLGGQARVDGVSGTWKELTDSVNSMAGNLT
SQVRNIAQVTTAVARGDLSQKIDVDARGEILELKNTINTMVDQLSSFADQVTRVARDVGT
EGRLGGQAQVPGVAGVWRDLTESVNGMAGNLTGQVRNIAQVATAVARGDLSQKITVDARG
EILELKNTLNTMVDQLSSFAEEVTRVAREVGTEGQLGGQAEVQGVSGTWKDLTQSVNFMA
NNLTIQVRQIAEVTTAVAKGDLSKKITVDAKGEILELVTTVNTMVDQLSSFAEQVTRVAR
EVGTEGILGGQAHVPGVTGIWKDLSGNVNLMAKNLTMQVRNISQVAAAVANGDLTRTVTI
EAAGEVAQLADTFNSMVKTLSSFADQVTKVAREVGTDGILGGQAHVPGVAGTWKDLTESV
NSMASNLTGQVRNIAMVTTAIAKGDLTKKIDIDARGEILELKTTINTMVDQLSSFAEEVT
RVAREVGTEGQLGGLARVRDVDGTWRDLTESVNEMAGNLTRQVRAIARVATAVTRGDLNL
KIDVDASGEIKELQDYINKMIANLRDTTIANQEQDWLKGNLARISALMQGRRDLDDVASL
IMSELTPVVSAQHGAFFLALPFLDGKDLAPDNDDQYELRMLGSYGYSMGSMPTSFRPGEA
LVGTAAKEKRTILVENAPSGYLKISSGLGEAPPAQVIVLPVLFEGTVLGVIELASFTPFT
QIQKDFLSQIAEMIATSVNTISVNTKTEVLLKQSQELTEQLRERSDELENRQKALQASNA
ELEEKAELLARQNRDIEVKNTEIEEARQVLEERAEQLAVSMRYKSEFLANMSHELRTPLN
SLLILAKLLADNAESNLTPKQVEFAETIHGAGSDLLQLINDILDLSKVEAGKMDVSPTRI
ALVQLVDYVEATFRPLTAEKGLDFSVRVSPELPATLHTDEQRLLQVLRNLLSNAVKFTDS
GAVELVIRPAGADVPVAIREQLLEAGSLRDADADMIAFSVTDTGIGIAASKMRVIFEAFK
QADGTTSRKYGGTGLGLSISREIARLLGGEIHAQSEPGRGSTFTLYLPLHPSELPPQGYA
HNASAALEAGELLESEDELAERRETPAEVKSYRETQNGAAALFRRRRRSVSAGSPSASLA
QGNGHAQEHWAQQAAQEAASQARRTAARFDGEKVLIVDDDIRNVFALTSVLEQHGLSVLY
AENGREGIEVLEQHDDVTVVLMDIMMPEMDGYATTTAIRRMPQFAGLPIIALTAKAMKGD
REKAIDSGASDYVTKPVDPDHLLAVMEQWMRSE
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
gtggagtctggcgcagcgacgcggggcactaaggcgcgcgcgaaaggcggacagtccctg
agtgaccagcgcaagtcgcgcaaaccgcgcaatggaaccacgaccgtggacacggccgcc
ctgaaccggctgctcacggctctggaagcgatgcgcgacggcaatttccgcaagcggctg
acggtctcgggcgacggggtcatggccgagatcgccgcggtcttcaacgaggtggcggac
cggaatctgcatctgaccggcgagctgtcgcgggtgcggcgggtcgtcgggcgtgagggc
aagctcaccgagcggctggagacgggggccaccgaggggtcctgggcggcggcgatcgac
gcgtcgaacgcgctggtcgacgacctcgtgcggcccgtctccgaggtcagccgggtgctg
tcggccgtggcggacggtgatctgtcgccgcgcatggagctgcggacacaggcgccggac
gggaccgggcacccgttgcgcggggagttcctgaaggtcgggcgtacggtcaacaacctg
gtcgaccagctgtccacgttcaccgacgaggtcacccgggtggccagcgaggtgggcacc
gagggcaagctgggcgggcaggccaaggtgcgcggcatgtccggttcgtggaaggacctg
acggagtccgtcaacacgatggcgtatcgcctcaccgctcaggtgagggacatcgctctg
gtgacgaccgcggtcgcgaagggtgatctgtcccggaaggtcacggttcacgtggccggc
gagatgctggagctgaaggagaccgtcaacacgatggtcgaccagctctccgcgttctcc
tccgaggtgacgcgagtcgcccgtgaggtgggcaccgagggtcagctcggggggcaggcc
gaggtgccgggcgtggccggggtgtggaaggaactcaccgattcggtgaacaccatggcc
ggcaacctcacgcttcagatgcgcgggatcgctcaggtcaccaccgcggtcgccaatggt
gatctgtcgcagaaggtgaccgtgccggcgcgcggcgaggtcgccaagctcgccgagacg
atcaaccagatgaccgagacgctgcggatcttcgccgacgaggtcacgcgtgtggccaac
gaggtcggtgccgagggtcggctgggcggtcaggcccaggtgccgggtgcggcgggaacc
tggaaagacctcaccgattccgtgaacaccgtcttccggaacctgaccatccaggtgcgg
gacatcgcggcggtgacgacggccgtggccaacggtgacctttcgcagaaggtcaccgtg
gatgtcgcgggcgagatgctcgaactgaagaacaccgtcaacgggatggtcgaccagctc
tcctacttcggtgccgaagtgacccgggtggccaatgaggtcggtgccgagggtcggctg
ggtggtcaggcgcaggtgccgggcgcggcggggacgtggaaggacctgacggactccgtc
aacacggcgttccggaatctcaccggacaggtgaggaacatcgcggccgtgacgacggcc
gtggccaacggtgatctctcgcagaaggtcaccgtggatgtcgcgggcgagatgctcgaa
ctgaagaacaccgtcaacacgatggtcgaccagctgtcgagcttcgccgaccaggtgacg
cggatggcccgggacgtgggtacggagggccggctgggcggtcaggcccgcgtggacggt
gtgtccggcacctggaaggagctcaccgactccgtcaactcgatggccggcaatctcacc
tcgcaggtgcgcaacatcgcgcaggtgacgacggccgtggcgcgcggcgacctgtcgcag
aagatcgacgtggacgcgcgcggcgagatcctggagctgaagaacaccatcaacacgatg
gtcgaccagctgtcgtccttcgccgaccaggtgacccgggtcgcccgggacgtgggtacg
gagggccgtctcggcggtcaggcgcaggtgcccggcgtggccggtgtgtggcgcgacctc
accgagtccgtgaacggcatggccggcaacctgaccggccaggtgcgcaacatcgcccag
gtcgccacggctgtggcccggggcgacctctcccagaagatcaccgtggacgcgcgcggg
gagatcctggagctgaagaacacgctgaacacgatggtggaccagctgtcgtcgttcgcg
gaggaggtcacccgggtcgcccgtgaggtgggtacggagggccagctcggcggtcaggcc
gaggtgcagggcgtctccggcacctggaaggacctcacgcagtcggtgaacttcatggcg
aacaacctgaccatccaggtgcgccagatcgccgaggtcacgacagccgtcgccaagggc
gacctgtcgaagaagatcaccgtcgacgccaagggcgagatcctcgaactcgtcaccacc
gtcaacacgatggtcgaccagctgtcgtccttcgccgagcaggtgacccgggtggcccgt
gaggtgggcaccgagggcatcctcggcggccaggcgcacgtgccgggcgtcaccggcatc
tggaaggacctcagcggcaatgtgaacctgatggccaagaacctgaccatgcaggtgcgg
aacatctcccaggtcgccgcggccgtcgccaacggcgacctgacccgtacggtcacgatc
gaggcggccggtgaggtcgcgcagctcgccgacaccttcaacagcatggtgaagacgctg
agttcgttcgccgaccaggtcaccaaggtggcccgtgaggtgggtacggacggcatcctg
ggcggccaggcgcatgtgccgggtgtggcgggtacgtggaaggacctcaccgagtcggtg
aactcgatggcgtccaacctcaccgggcaggtccgcaacatcgcgatggtgacgaccgcc
atcgccaagggcgacctgaccaagaagatcgacatcgacgcgcgcggcgagattctggag
ctgaagaccaccatcaacacgatggtcgaccagctgtcctccttcgccgaggaggtcacc
cgcgtggcccgcgaggtgggcaccgagggacagctcggcggcctcgcgcgcgtgcgggac
gtcgacggcacctggcgggacctcaccgagtcggtgaacgagatggccgggaacctgacc
cggcaggtgcgtgccatcgcgcgcgtggccaccgcggtgacccggggcgacctgaacctc
aagatcgacgtcgacgcgtccggcgagatcaaggagctgcaggactacatcaacaagatg
atcgccaacctgcgcgacaccacgatcgccaaccaggagcaggactggctcaagggcaac
ctcgcccggatctccgccctgatgcagggccggcgggacctcgacgacgtggcctcgctg
atcatgagcgagctgacgccggtggtgtccgcgcagcacggcgcgttcttcctcgcgctg
ccgttcctcgacggcaaggacctggccccggacaacgacgaccagtacgagctgcgcatg
ctcggctcgtacggctattcgatgggttcgatgccgacgtcgttccggcccggggaggcg
ctggtcgggacggcggccaaggagaagcgcaccatcctggtggagaacgcgcccagcggc
tacctgaagatctcctccgggctcggcgaggcgccccccgcgcaggtcatcgtgttgccg
gtgctcttcgaggggaccgtgctcggggtgatcgagctggcgtcgttcacgccgttcacg
cagatccagaaggacttcctgagccagatcgcggagatgatcgcgacgagcgtcaacacc
atctccgtcaacaccaagaccgaggtgctgctgaagcagtcgcaggagctgaccgagcaa
ctgcgtgagcggtccgacgagttggagaaccggcagaaggccctccaggcgtccaacgcc
gaactggaggagaaggccgagctgctggcccggcagaaccgggacatcgaggtcaagaac
accgagatcgaggaggcgcggcaggtcctggaggagcgcgccgagcagctcgcggtgtcc
atgcgctacaagagcgagttcctcgcgaacatgtcgcacgagctgcgcacgccgctgaac
tcgctgctgatcctcgccaagctgctcgccgacaacgccgagtcgaacctgacgccgaag
caggtcgagttcgccgagacgattcacggggcgggttcggacctgctccagctcatcaac
gacatcctggacctgtcgaaggtcgaggcgggcaagatggacgtctcgcccacccggatc
gccctcgtccagctcgtcgactacgtggaggccaccttccggccgctgaccgcggagaag
gggctcgacttctccgtacgggtctcgccggagctgcccgccacgctgcacacggacgaa
cagcgcctgttgcaggtcttgcggaacctgctgtccaacgcggtgaagttcaccgactcc
ggggccgtggagctggtcatccggccggcgggcgcggatgtgccggtggccattcgggaa
cagctgctggaggcgggctcgctgcgggacgcggacgccgacatgatcgccttctcggtg
acggacacgggcatcgggatcgcggccagcaagatgcgggtcatcttcgaggcgttcaag
caggcggacggcaccacgagccgcaagtacggcggtacgggtctggggttgtccatctcg
cgggagatcgcccggctgctgggcggcgagatccacgcgcagagcgagccgggacgcggt
tccaccttcaccctgtatctgccgctgcacccgagcgaactgccgccgcagggctacgcg
cacaacgcgtccgccgcgctggaggcgggggagctgctggagtccgaggacgagctggcc
gagcgccgggagacgccggccgaggtgaagtcgtaccgcgagacccagaacggggccgcc
gcgctcttcaggcggcgccgccggtccgtgtcggccggttccccgtccgcctcgctcgcg
cagggcaacgggcacgcgcaggagcactgggcgcagcaggccgctcaggaggcggcgtcg
caggcgcgccggacggcggcccgcttcgacggcgagaaggtcctcatcgtcgacgacgac
atccgtaacgtcttcgcgctcaccagcgtcctggagcagcacggcctgtccgtgctgtac
gccgagaacggccgtgagggcatcgaggtcctggagcagcacgacgatgtgacggtcgtg
ctgatggacatcatgatgcccgagatggacgggtacgcgacgaccacggcgatccgccgg
atgccccagttcgccgggctgccgatcatcgcgctgacggccaaggcgatgaagggcgac
cgggagaaggcgatcgactcgggtgcttccgactatgtgacgaagccggtcgatccggat
catctgctggcggtcatggagcagtggatgcgaagtgagtga
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