Streptomyces deccanensis: L3078_33820
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Entry
L3078_33820 CDS
T08215
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K19789
DNA repair protein RadD
Organism
sdec
Streptomyces deccanensis
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdec03400
]
L3078_33820
DNA repair and recombination proteins [BR:
sdec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
L3078_33820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_34
GAP1-M
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ULR53861
LinkDB
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Position
complement(7647651..7649225)
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AA seq
524 aa
AA seq
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MPYIRERLGKHMCALLDLIDGGSAGDERLRAVAAVAVDAEKLVSHQTDREELLRLLPADK
QTELAQRLGADGAGTDALLYLNGLKWASEQQRQLLEFFGFSVDRAPALPPLFRQDAEPEY
GLFPHQRRAAARVKELLYDGPRRVVLHLPTGVGKTRTGMNLIADHLRQHEPTLVVWLARG
QELLEQAAAEFERAWSKLGDRPITVVRMWGEAPTDVEALTDGLVILGLEKAVSADKSDPE
LLRKLASRSTLTVFDEAHQIIAPTYQRVVDALTIRPDASLLGLTATPGRTWADVTQDERL
SDFFARQKVMLQIDGYSNPVTALIEQGYLAKPIMKTVASEAGLHLSARDQQLLAKSFDIP
SDIIASLASDEQWNLKVVQTVLELLERQHRRILVFAASVDHCRLIAAVLSALGLDADFVT
GESSPRHRNDAIRRFKGAGRRPMILCNFGVLTTGFDAPAASAAIIARPTKSLVLYSQMVG
RVIRGPKAGGTATCEIVTVVDPELPGFGDVAEAFTNWEDVWETA
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacatccgcgagcggctcggcaagcacatgtgcgctctgcttgacctcatcgac
ggcggaagcgccggcgatgagcggctccgggcagtcgctgccgtggcggtggacgccgag
aagctcgtgtcccatcagacggaccgcgaggagctgctgcggctcctgcccgccgacaaa
cagacggagcttgcccaacgtcttggggcggacggcgcgggcaccgatgcccttctctac
ctgaacggtctgaagtgggcgagtgagcagcagcggcaactgctggagttcttcggcttc
agcgtcgacagggcgcctgcgctgcccccgctctttcggcaagacgccgaaccggagtac
gggctgttcccccaccaacggcgcgcagccgcacgcgtgaaggagttgctgtacgacgga
ccgcggcgggttgttcttcacctgccgacgggcgtgggcaagacccgcaccggaatgaac
ctgatcgccgaccatctgcgacagcacgagcccaccctcgtggtctggctggcgcgtggg
caggaactgctggaacaggcggctgcggagttcgagcgcgcgtggtccaagctcggcgac
cgtccgattacggtcgtccggatgtggggcgaggcgcccaccgatgtggaggcgctgaca
gacggccttgtcatcctggggctggagaaggccgtctccgcggacaagagcgatcctgag
cttctccgcaaactcgcatcgcgcagcaccctcaccgtcttcgacgaggctcatcagatc
atcgcgccgacctaccagcgagtggtggacgccctcaccatccgccccgatgccagcttg
ctgggcctgacggccacccctggccgaacctgggcggacgtcacgcaagatgagcggctg
tcggacttcttcgcccgccagaaggtcatgctgcagatcgacggatacagcaacccggta
accgccctcatcgaacagggctacctggccaagcccatcatgaagaccgtcgcctccgaa
gccggcctgcatctgtccgcgcgcgatcagcaactcctcgcgaagtccttcgacatcccg
tcggacatcatcgcgtcgctggccagcgacgagcagtggaacctcaaggtcgtccagacc
gtgctggagctactggaacgccagcaccgcaggatcctggtattcgcggcctccgttgac
cattgccgcctgatcgccgccgtcctgtcggcgctcggcctcgacgctgacttcgtcacc
ggcgagtcctctccccggcaccggaacgacgccatcagacgcttcaagggcgccggccga
cgccccatgattctgtgcaacttcggggtcctgaccacgggcttcgatgccccggcggcc
agtgctgccatcatcgcccgaccgaccaagtcgctggtcctgtacagccagatggtcggc
cgggtcatccgcggccccaaggccggaggaaccgcaacctgcgagatcgtcaccgtcgtc
gacccggagctgcccgggttcggggacgtggccgaggcattcaccaactgggaagacgta
tgggagaccgcgtga
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