Streptomyces deccanensis: L3078_35870
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Entry
L3078_35870 CDS
T08215
Name
(GenBank) trypsin-like peptidase domain-containing protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sdec
Streptomyces deccanensis
Pathway
sdec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L3078_35870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdec03019
]
L3078_35870
03110 Chaperones and folding catalysts [BR:
sdec03110
]
L3078_35870
03029 Mitochondrial biogenesis [BR:
sdec03029
]
L3078_35870
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdec04147
]
L3078_35870
Enzymes [BR:
sdec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
L3078_35870
Messenger RNA biogenesis [BR:
sdec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
L3078_35870
Chaperones and folding catalysts [BR:
sdec03110
]
Heat shock proteins
HSP60 / Chaperonin
L3078_35870
Mitochondrial biogenesis [BR:
sdec03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
L3078_35870
Exosome [BR:
sdec04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
L3078_35870
Exosomal proteins of other body fluids (saliva and urine)
L3078_35870
Exosomal proteins of breast cancer cells
L3078_35870
Exosomal proteins of colorectal cancer cells
L3078_35870
Exosomal proteins of bladder cancer cells
L3078_35870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Trypsin_2
Peptidase_S32
Tegument_dsDNA
Gln_amidase
Motif
Other DBs
NCBI-ProteinID:
ULR54233
LinkDB
All DBs
Position
8100878..8103247
Genome browser
AA seq
789 aa
AA seq
DB search
MNGARPAPDAGLQAITEPTAGMQSVQQSRAMLTEAEQQVARLERRGVPVATGFLVGPGLL
LTAGHAVRLGLGACGAEPVSGMVAVFDHGADTGHPLARHGVRIPLAALLDSSPPATDDPA
PDGVPTEEDGLDFALVRLERHPPDVLDPAGVRRPRGYYGLSPDEYTFGSGTLNVFHHSLR
PDPDHGRSRRERLSPDGRRLRYQGANTLEGSSGSPVVTGDGRLVALHHGYRGNENQAVPT
RLIAERVLAGPHAALLRRALDALPHHARPQYPAAAGATTVGGAMGALLGPWPARSAAVGL
DGEPVRAADARETAEHFRTADPRRALGVDPVVEAARAMDTTAGDGAATAAVLAAALIREA
ADRCTAGADPREVARGAVEALARARDALSGLVEPCTRPGAVTRAATADRHLADAVSAAAS
LAGPHGILVCEPGVTRTVETPVVRQGLRLPAGHAFPYTTVAGADPWTRRIRLVRPYVLLL
DCVTGDGEAFARLRGRIAAEGSPLLILTTADTSDPRAGLLRALGDPADGPVPTVVRVASV
ANRHHRLRALALLTGATALTEDSQVLPGTAWFDVLGRVDLALVTARETVLVGGHRDPAVL
DRWIAAAPARRALADSDDEREALDEQLAWLTSRAVTLAVGAETAEELAPRAAAAQRGARA
AQAALRSGTVPGGGHALLCVRAALPSDSGSVGTDVVRAALAAPFRLLASRAGIDPVEIER
LCAEPDPGRLAQERPFADLDGVRPHGDGPDGEGLDGNGPDGDGPRDAVEILDLALETAGK
ALVVFLDTV
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggggcgcggcccgctccggacgccgggctccaggccatcaccgagcccaccgcc
ggaatgcagtcggtccagcagtccagggcgatgctcaccgaggccgagcaacaggtcgcc
cggctggagcgccgcggggtcccggtggccaccggattcctggtcggacccggcctgctg
ctcaccgcgggacatgccgtacggctcggcctcggggcgtgcggcgccgaaccggtgagc
ggaatggtggccgtcttcgaccacggcgccgacacggggcaccccctcgcgcggcacggt
gtgcggatcccgctggccgcgctgctcgactccagcccacccgccacggacgacccggcg
ccggacggcgtgcccaccgaggaggacggcctcgacttcgccctcgtccggctggagcgg
cacccgcccgacgtgctggacccggccggcgtccggcggccgaggggctactacgggctg
tcccccgacgagtacaccttcggcagcggcaccctgaacgtgttccaccactccctgcgg
ccggaccccgatcacgggcgcagcaggcgagaacgtctcagcccagacggccgacgcctt
cggtaccagggcgccaacaccctcgaaggctcctcgggcagccccgtagtcaccggcgac
ggccgcctcgtggccctgcaccacggctaccggggcaacgagaaccaggccgtcccgacc
cggctcatcgccgagcgcgtcctggccggaccgcatgccgcgctgctgcgccgcgccctc
gacgcgctgccgcaccacgcgcggccgcagtatccggccgcggccggtgccacaactgtc
ggcggggccatgggtgccctgctcggcccctggcccgcgcgctcggcagcggtcggcctc
gacggagagcccgtgcgcgcggccgacgcccgggagacggccgagcacttccggacggcc
gacccgcgacgtgccctcggcgtcgacccggtcgtggaggccgcccgagcgatggacacg
acggccggggacggggcggccaccgcggccgtgctggcagcggccctgatccgggaggcc
gccgaccgctgtacggcgggcgccgacccacgagaggtcgcgcgcggtgccgtcgaggcg
ctggcacgggcccgtgacgcgttgtccggcctcgtcgaaccctgcacccggccgggcgcc
gtcacccgcgcggcgaccgcggaccggcacctggccgacgccgtctcggccgccgcgtcg
ctggcgggtccgcacggcatcctcgtctgcgagcctggtgtgacccgcacggtcgagacg
cccgtcgtccgccagggcctgcggctgccggccggacacgcgttcccgtacaccaccgtc
gcgggagccgatccctggacgcgccggatccggctcgtacggccgtacgtcctgctgctc
gactgtgtgacgggcgacggggaggcattcgccaggctgcgcggccggatcgccgccgaa
ggcagtccgctgctgatcctgaccaccgccgacacctctgatccccgagccggtctgctg
cgtgcgctgggcgacccggcggacggtcccgtgccgacggtcgtccgcgtcgcctccgtc
gcgaaccgccaccaccggctgcgcgcgctggctctgctgactggagccaccgccctcacc
gaggactcccaagtgctcccgggaaccgcctggttcgacgtcctgggccgcgtcgacctg
gcgctggtcaccgcgcgagagacggtactcgtgggcggccaccgggatccggcggtactg
gaccgatggatcgccgctgctcccgcacgccgcgccctggccgactccgacgacgaacgg
gaggcactggacgaacagctcgcctggctgacctcgcgcgccgtgaccctggccgtcggc
gcggagacggcggaggaactggcaccgcgtgcggccgccgcgcagcggggcgcccgggcg
gcccaggccgcgctgcgctcgggcaccgtgcccggcggcggacacgcgctgctctgtgtc
cgcgccgcgctcccgtccgattccggctcggtcggcacggacgtcgtacgggccgcgctc
gccgctccgttccggctgctggcgtcacgagccgggatcgacccggtcgagatcgaacgg
ctgtgcgccgagcctgatcccggtcgacttgcccaagagcggccgttcgccgacctcgac
ggagtccgtccgcacggggacggccccgacggggagggcctggatggaaacggtccggac
ggggacggcccgcgggacgccgtcgagatcctggatctcgccctggagacggcggggaag
gccctggtggtcttcctcgacaccgtctga
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