Streptomyces deccanensis: L3078_35910
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Entry
L3078_35910 CDS
T08215
Name
(GenBank) alginate lyase family protein
Organism
sdec
Streptomyces deccanensis
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Gene cluster
GFIT
Motif
Pfam:
Alginate_lyase
He_PIG
DUF1349
fn3
Motif
Other DBs
NCBI-ProteinID:
ULR54240
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Position
8114809..8118162
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AA seq
1117 aa
AA seq
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MLPLSRRSLLGAAGLTAAAGTGILSAATTASAAPASAAWARSAEATRTFSHPGLLHSAAD
LDRLRSAVAAKEAPIHDGYLVLAAHARSKATYAVQNTGQITSWGRGPSNFMSQAVADSAA
AYQNALMWCVTGERAHADKARDILDAWSASLTMITGADGPLGAGLQAFKFVNAAELLRHT
GYDGWAEADIARCERSFLDVWYPAVSGYMLYANGNWDLTAIQTVLAIGVFCEEPVLFEDA
LRFAAAGAGNGSVPGRIVTAAGQGQESGRDQGHEQLAVGLMGDAAQVAWNQGVDLWGFDG
GRLLTNAEYAARYNLGGDVPFTPDLDRTGKYIKKAVSAVGRGTLPPIYEMYLAHYAGVRG
LDAPATKAAVFRGTGGARVVEGSNDDLPSFGTFAYAGATAPASTPAPAPPAGVTAVGGPG
AVTVAWLPSAWATGYTVLRSTRPEGPYEEVATGLDEPTYTDREVRRGRTYHYTVTASNAP
GDSGSSQPVAASAGLPGPWDARDLGTVRIPGSALFDGERFVLRASGTANTYHLAHLPLRG
DGTVTARIVWPLSSQYSKIGVTLRDALDPDAAHASMLIQGLPLHTWSGVWTVREAAGADI
SATGSTPVPPTQQQAITTAAAFPISGLGALPESATPLEAPYVEGAGDGYRLRAPYWVRVI
RKGRRCTGAISPDGVRWTEVGSAEVDLGRTAHAGLVLTSCLGVDEEYADTGTGAFDNVTV
VSATGGEVWSVPRPARQVTDLKATAGADAVELTWTDPDLSARYRVRRATRADGTYRTIAT
GVAPVGFGAHLRYADATGTPGTTYHYVVTKTNEGGPGPRSKPAAARMPSPATPQLATTAG
VFANRGVPFQYLIRASHAPVRFGASGLPEGLRVDERTGLISGTPTRTGEFTVTTTAGNAA
GEASGTLALTVGTPPPDPWTYGDLGDVVLDERAFGTLGVVAVRTPGSTAYEEDGTFVVRG
AGVDLSVNNQGMTGQFTRRPVTGDCEVTARLVSRTGATADRVGLLMAKSLSPFDQAAGAI
VSSGTSAQLMLRTTVAGRSAFTGGATVAAPCLLRLRRVGTAFSAAVSTDGGVTFTPLADG
EIPGFGDAPYHVGLVVCSRDPRAHVTARFSEVSVTPL
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
gtgcttcccctcagcagacggtcgctgctcggcgcggccggactcacggccgcggccggc
accggaatcctgtcggccgccaccaccgcctccgcagccccggcctccgccgcgtgggcg
cgctccgccgaggcgacccgcaccttcagccacccgggcctcctgcacagcgcggccgat
ctggaccggctgaggagcgcggtcgccgcgaaggaggcgccgatccacgacggctacctc
gtcctcgcggcccacgcccgctccaaggcgacctacgccgtgcagaacacgggccagatc
acctcctgggggcgcggccccagcaacttcatgagccaggccgtcgccgactcggccgcc
gcctaccagaacgcgctgatgtggtgcgtgacgggtgagcgggcccatgcggacaaggcg
cgggacatcctcgacgcctggtccgcctccctcaccatgatcacgggtgccgacggcccg
ctcggcgccggtctgcaggcgttcaagttcgtcaacgcggccgagttgctgcggcacacc
gggtacgacggctgggcggaggcggacatcgcacgctgcgaacggtcgttcctcgacgtc
tggtacccggcggtctccggctacatgctctacgccaacggcaactgggacctgacggcc
atccagaccgtcctggccatcggcgtgttctgcgaggagcccgtgctcttcgaggacgcg
ctgcggttcgccgcggcgggcgccggcaacggcagtgtccccggccggatcgtcacggcc
gccggtcagggccaggagtccggccgcgaccaggggcacgagcagctcgcggtcggcctg
atgggcgacgcggcgcaggtggcctggaaccagggcgtggacctgtggggcttcgacggc
ggccggctcctgacgaacgccgagtacgccgcccgctacaacctcggcggcgacgtcccc
ttcacccccgacctggaccgcaccggcaagtacatcaagaaggccgtctcggccgtcggc
cgcggcaccctcccgccgatctacgagatgtacctcgcccactacgccggggtgcgcggc
ctcgacgcccccgcgacgaaggcggcggtcttccggggtaccgggggcgcccgcgtcgtc
gagggcagcaacgacgacctcccgagcttcggcaccttcgcctacgccggggccaccgcc
cccgcgtcgacacccgcaccggcgcccccggccggggtcacggcggtgggcggccccggg
gccgtgaccgtggcgtggctgccgtcggcctgggccaccgggtacaccgtcctgcgctcc
acccgccccgagggcccgtacgaggaggtcgccaccggcctcgacgagccgacgtacacc
gaccgggaggtgcgccgggggcggacgtaccactacaccgtgactgcctccaacgcacct
ggtgacagcggcagttcgcagcccgtggctgcttcggccggcctgcccggtccgtgggac
gcccgggacctggggacggtacggatcccgggttccgccctgttcgacggcgagcggttc
gtgctccgggcgagcggtacggccaacacgtaccacctggcccatctgccgctgcggggc
gacggcacggtcaccgcccggatcgtgtggccgctgagctcccagtactccaagatcggc
gtcaccctccgcgacgccctcgacccggacgccgcgcacgcctcgatgctgatccagggg
ctgccgctgcacacctggagcggggtgtggaccgtccgcgaggcggccggggccgacatc
tcggcgaccggcagcacacccgtgccgcccacccagcagcaggcgatcaccacggccgcc
gcgttcccgatctccggcctgggcgcgctcccggagtcggcgacccccctggaggccccg
tacgtcgagggcgcgggcgacggctaccggctgcgggccccgtactgggtgcgggtgatc
cgcaagggccgccgctgcaccggggcgatctcgccggacggcgtccggtggaccgaggtc
ggcagcgccgaggtggacctggggcggaccgcgcacgccggactggtcctcacgtcctgt
ctgggcgtggacgaggagtacgccgacaccggcaccggcgccttcgacaacgtcaccgtg
gtctccgccaccgggggagaggtctggtcggtgccccgccccgcccgacaggtcaccgac
ctcaaggcaaccgccggcgccgacgcggtcgaactgacctggaccgaccccgacctctcc
gcccgctaccgggtgcggcgcgccacccgcgccgacggcacctaccggacgatcgcgacc
ggcgtcgccccggtcggcttcggcgcccacctccggtacgcggacgccaccggcaccccc
ggcacgacgtaccactacgtcgtcacgaagaccaacgagggcggaccaggcccccgttcg
aagccggccgccgcgcgcatgccgtcgcccgccacgccccaactcgccaccaccgcaggg
gtgttcgccaatcggggcgtccccttccagtacctgatccgtgcctcgcacgcacccgta
cgcttcggcgcgagcggactccccgagggcctgcgcgtcgacgaacgcacgggcctgatc
tccggaacccccacccggaccggcgagttcaccgtcaccaccaccgcgggcaacgcggcg
ggcgaggcgtccggcaccctcgccctgaccgtcggcacaccgccgcccgacccctggacg
tacggcgatctgggcgacgtcgtcctcgacgagcgcgccttcgggaccctgggcgtagtc
gcggtccgtacgcccggcagcacggcgtacgaggaggacgggaccttcgtcgtacggggc
gccggtgtcgatctgtccgtcaacaaccaggggatgaccgggcagttcacgcggcggccg
gtcaccggcgactgcgaggtcaccgcccggctggtctcccgtaccggcgccacggccgac
cgggtcgggttgctgatggccaagtcgctgtcgccgttcgaccaggcggccggggcgatc
gtcagcagcggcacgagcgcccagctgatgctccggacgaccgtggccggacggtcggcg
ttcacgggcggagccacggtcgccgccccctgcctgctgcggctgagacgcgtcgggacc
gcgttctccgcggcggtgtccacagacggaggtgtcaccttcacccccctcgccgacgga
gagatccccggcttcggtgacgccccctaccacgtgggcctggtggtctgctcccgcgat
cccagggcccacgtcaccgcgcgattcagcgaggtgagcgtcacccctctctag
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