Streptomyces deccanensis: L3078_37165
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Entry
L3078_37165 CDS
T08215
Name
(GenBank) ribonuclease
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
sdec
Streptomyces deccanensis
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdec03019
]
L3078_37165
03016 Transfer RNA biogenesis [BR:
sdec03016
]
L3078_37165
Enzymes [BR:
sdec01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
L3078_37165
Messenger RNA biogenesis [BR:
sdec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
L3078_37165
Transfer RNA biogenesis [BR:
sdec03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
L3078_37165
Prokaryotic type
L3078_37165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
DUF4179
Motif
Other DBs
NCBI-ProteinID:
ULR54465
LinkDB
All DBs
Position
8407750..8408136
Genome browser
AA seq
128 aa
AA seq
DB search
MRFPPRAPRIGVAAALLSALLVGGTVTATPAAAAVGSICYSDLPSQAHTTLDLIARGGPY
PYAQDGSVFQNRERILPSRSTGYYHEYTVKTPGSSTRGARRIVTGQQNEEDYYTADHYAS
FDLVDYDC
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgagattccccccacgagcaccacgcatcggagtggcggccgccctcctgtccgctctc
ctcgtcggcggcaccgtcaccgccaccccggctgccgcggcggtcggcagcatctgctac
agcgacctgccgtcgcaggcgcacaccacgctcgacctgatcgcgcgaggcggcccctac
ccgtacgcgcaggacggcagcgtcttccagaaccgggagcgcatcctgccgtcgcggtcc
accggctactaccacgagtacacggtgaagacccccggctcctccacccgcggggcccgc
cgcatcgtcaccggccagcagaacgaggaggactactacaccgccgaccactacgcgtcc
ttcgacctggtcgactacgactgctga
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