Streptomyces deccanensis: L3078_42405
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Entry
L3078_42405 CDS
T08215
Name
(GenBank) ABC transporter permease subunit
KO
K02033
peptide/nickel transport system permease protein
K02034
peptide/nickel transport system permease protein
Organism
sdec
Streptomyces deccanensis
Pathway
sdec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L3078_42405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdec02000
]
L3078_42405
Transporters [BR:
sdec02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
L3078_42405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ULR55405
LinkDB
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Position
9652887..9654701
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AA seq
604 aa
AA seq
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MSSTSTAGVHGPPTRWRAGAGRLAAGTALLTAVAFLPWLSGVDPALTVLRARAADQDPTP
AQLSAVREQLGLDEGPFAHLGHWLSGLAHGDAGTSWVSGDPVLPQVTTALAVSVTLMLGA
LVVTIAVAAAVCARTLHLGSRRRLRHKRAGTAAAVPAALPKFLLASLLATVFGVWLGWFP
SQGWEGPRSMVLPALALGIPSGAMIGGLLDQALPAAFNEPWARTWRAYGCSGGRIARTAL
RTALAGVLPQLLPTVVALVGGAVAVEKIFNIPGLGRLSLDAATAQDMPPLQTATLTLVLL
GVCAGLLIQVLRHALLGPALRDGALPALHPPRLPRSRSLPWIVGLCATTLLAVVVAGLLR
DPSHVETTARLLSPSLAHPLGTDSLGRDLLARLGHGALRTVGVALAVTVVSAVVGLVIGT
TAQLGAGLTEVVSTMPAVLAGLLTTAVTGPSVWGAACAVCVVAWTPYAAQSAALLEQERA
SGHLLASISFGAGPTYLLRHHLLPAVLPALVRNALLRLPTTVLVLASLGFLGLGEQPPTP
EWGRLLSENQPYAELAPWTVMGPSAALVLLSVLSISTTTWSRGRPRGAAGVTASAPPPPT
AVRP
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcacgtcgacggccggtgtccacggcccgcccacgcgatggcgggcgggcgcc
ggccgcctcgccgccggaacggccctcctgacggccgtggccttcctgccgtggctgtcc
ggcgtcgaccccgccctgaccgtgctgcgcgcccgcgccgccgaccaggaccccaccccg
gcccagctgtccgccgtacgcgagcaactgggcctggacgaggggccgttcgcccatctc
ggacactggctgagcggactggcgcacggggacgcgggcacctcctgggtgtcgggcgat
ccggtactgccccaggtgacgacggccctcgcggtctccgtcacgctgatgctcggcgcc
ctggtggtcacgatcgccgtggccgcggcggtctgcgcccgcaccctccacctcggatcc
cggcgaaggctgcgccacaagcgggcgggcaccgcggccgccgtgccggccgccctgccc
aagttcctgctcgcctcgttgctcgcgacggtcttcggggtgtggctgggctggttcccg
tcccagggctgggagggaccgcgatcgatggtgctgcccgctctcgccctcggcatcccc
tccggcgccatgatcggcgggctgctcgaccaggccctgcccgccgccttcaacgaaccc
tgggcacgcacctggcgcgcctacggctgctcgggcggccgcatcgcccgcacggcactg
cgcaccgccctcgccggtgtgctcccgcagctcctgccgaccgtcgtcgccctggtcggc
ggcgcggtcgcggtcgagaagatcttcaacatcccgggactcggccgtctctcgctggac
gcggccaccgcccaggacatgccgccgctccagacggcgaccctgaccctggtgctgctc
ggcgtctgcgccggcctcctgatccaggtcctgcggcacgccctgctcggtcccgccctg
cgggacggtgccctgcccgccctgcacccgcccaggctcccgcgctcacgctcgctgccc
tggatcgtcggactctgtgccacgaccctcctcgccgtggtcgtggccggcctcctgcgg
gacccgtcgcacgtcgagacgacggcgaggctgctgtccccgtccctcgcgcaccctctc
ggcaccgactcgctcggccgcgacctgctggcccggctgggtcacggagccctccgtacg
gtcggtgtggcgctcgcggtcacggtggtcagtgccgtcgtcggcctggtgatcggcacg
accgcccagctgggggcgggcctgaccgaagtggtctcgacgatgccggccgtcctcgcc
ggactgctcaccaccgccgtgaccggcccgtcggtctggggcgccgcgtgcgcggtgtgc
gtggtggcctggacaccgtacgccgcccagtccgccgccctgctggaacaggaacgggcc
agcggccacctcctcgcgtcgatctccttcggcgcgggccccacctacctgctccgccac
cacctgctgcccgccgtcctgccggccctggtgcgcaacgccctgctccgcctgcccacc
acggtcctcgtcctcgcctccctcggcttcctcggcctgggcgaacagccgcccactccc
gagtggggccgcctcctctcggagaaccagccctacgcggaactggccccctggaccgtc
atgggcccgtccgccgccctcgtcctcctctcggtcctctccatctccaccacgacctgg
agccgcggccggccccggggcgcggccggggtcacggcttccgcgccaccgcccccaact
gcggtacgaccgtag
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