Streptomyces deccanensis: L3078_44395
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Entry
L3078_44395 CDS
T08215
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sdec
Streptomyces deccanensis
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdec03400
]
L3078_44395
DNA repair and recombination proteins [BR:
sdec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L3078_44395
Archaeal homologous recombinant proteins
L3078_44395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Asp_Glu_race
Motif
Other DBs
NCBI-ProteinID:
ULR55763
LinkDB
All DBs
Position
10078799..10079968
Genome browser
AA seq
389 aa
AA seq
DB search
MKFLHTSDWHVGKTLKGRNRLEEQARILREITQIAIDNDVDAVLIAGDIYENASPTADAQ
RLVVRTLLRLAKHGIEVILIAGNHDHAATFEAYRPLMDIAGIHVYGQARPAAKGGVHTFH
ARSTGEPVNVAVLPFLSQRYAVRAAEIIANTPSQNVGAYDQLVRDVLANLTGAFTSDAVN
IIMAHLTCTGGTFGGGERPAQSIMEYHVPAAVFPVEAHYVALGHLHRRQQIPAACPVHYS
GSPYAIDFGEQNNTNVVCLVEATPNTPAQITDIPVTAGRRLRTVEGTVAQLTADPAGYGE
DYLRLVVTQPAYAGMRDDLYEALPNALQILIHPDHASTGATAGISVDQPIKTPVQLFADY
CHSVGVSDDRVTALFNQLHDDLTRSTARP
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttccttcacacctccgactggcatgtcggcaaaaccctcaagggccgcaaccgg
ctcgaggagcaggcacgcatcctgcgagagatcacccagatcgcgatcgacaacgacgtc
gacgccgtcctcatagccggcgacatttacgaaaacgcctcgccgaccgcagacgcccag
aggctggtcgtgcgtaccctgctgcgcctggccaagcacggcatcgaggtcatcctgatc
gccggcaaccacgaccacgctgccacgttcgaggcctacaggccgctgatggacatcgcc
ggcatccacgtctacggccaggccagaccggccgcgaagggcggcgtgcacaccttccac
gccaggtccaccggcgagcccgtcaacgtcgccgtcctgccgttcctctcccagcgctac
gccgtccgcgccgcggagatcatcgccaacaccccgtcgcagaacgtcggcgcctacgac
cagctcgtccgtgacgtcctggccaatctgaccggagcgttcacctcggacgccgtcaac
atcatcatggcccacctgacctgcaccggcggtaccttcggcggcggcgagcgacccgcc
caatccatcatggaataccacgtgccggccgctgtcttccctgtcgaggcccactacgtg
gccctgggccacctgcaccgccggcagcagatccccgccgcctgcccggtgcactacagc
ggctccccctacgccatcgacttcggcgagcagaacaacaccaacgtcgtctgcctcgtc
gaggccacccccaacacccccgcccagatcaccgacatccccgtcacggccggccgcaga
ctgcgcaccgtcgagggaaccgtcgcccagctgaccgctgaccccgccggctacggcgag
gactacctcagactcgtcgtcacccagcccgcctacgccggcatgcgcgacgacctgtac
gaagccctccccaacgctcttcagatcctgatccaccccgatcatgccagcaccggcgcc
acggcaggaatcagcgtcgaccagccgatcaagacgcctgtgcagctgtttgccgactac
tgccacagcgtcggcgtcagcgacgaccgggtcacggcgttgttcaatcagctgcacgac
gacctgacccgctcgaccgcccgcccctaa
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