Stutzerimonas degradans: GOM96_00340
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Entry
GOM96_00340 CDS
T08431
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sdeg
Stutzerimonas degradans
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdeg03016
]
GOM96_00340 (truA)
Enzymes [BR:
sdeg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
GOM96_00340 (truA)
Transfer RNA biogenesis [BR:
sdeg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GOM96_00340 (truA)
Prokaryotic type
GOM96_00340 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QGW19503
LinkDB
All DBs
Position
66764..67642
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AA seq
292 aa
AA seq
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MLHDVPEAAAESAAVGVSRIALGVEYKGSRYRGFQRQRAGVPSVQEALESALSRVAGGHP
VALSCAGRTDALVHASGQVVHFDTSVERSMHAWVMGANMNLPGDISVTWAKAMPTHFDAR
FSAMARRYRYVIYNDQIRPAHMAEEVTWNHRPLDIELMREAAKSFVGTHDFSAFRARQCQ
AKSPVKTVHHLQLLQHGKFIVIDVRANAFLHHMVRNFAGVLMTIGAGERPVEWAQQVLQT
RIRRTGGVTAHPYGLYLVRVEYPEEFELPQRYLGPHFLSGLADYQDSLPSND
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcttcacgacgtacctgaagcggcagccgaatcggctgccgttggcgtttccagaatt
gcactgggtgtcgagtacaaagggtcgcgttaccgcggcttccagcgccagcgtgcgggt
gtgccttcagtccaggaagcgcttgagagcgcgttgagcagagttgccggcggacacccc
gttgccttgagctgtgcagggcgcactgacgccctggtgcatgcgagcgggcaggtggtg
cactttgatacttcggttgagcgcagcatgcacgcctgggtcatgggggcgaacatgaac
ttgccgggtgatatcagcgtaacttgggcaaaggcgatgccgactcatttcgatgctcgt
ttcagcgctatggcgcgccgataccggtacgttatctataacgaccagattcgtccggcc
cacatggctgaagaggttacctggaaccatcggccacttgacatcgaattgatgcgcgag
gcagccaagtcgtttgtcggcacccacgatttcagtgcctttcgggcgcgccagtgccaa
gccaagtcgcctgtgaagaccgtgcatcatctgcagttgcttcagcatggcaaattcatt
gtgatcgacgtgcgtgccaatgccttcctgcatcacatggtgcgcaatttcgccggtgtt
ctgatgaccatcggagcgggcgagcgcccggtcgaatgggctcagcaggtattgcagacg
cgtatacgtcgaaccggtggggtcacggctcatccttacggactgtacttggtgcgggtt
gaatatccagaagagtttgagctgcctcaacggtatctcggtccgcactttctttccggt
cttgccgattatcaggattccctcccgagcaatgactag
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