Stutzerimonas degradans: GOM96_00540
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Entry
GOM96_00540 CDS
T08431
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg00010
Glycolysis / Gluconeogenesis
sdeg00020
Citrate cycle (TCA cycle)
sdeg00260
Glycine, serine and threonine metabolism
sdeg00280
Valine, leucine and isoleucine degradation
sdeg00310
Lysine degradation
sdeg00380
Tryptophan metabolism
sdeg00620
Pyruvate metabolism
sdeg00630
Glyoxylate and dicarboxylate metabolism
sdeg00640
Propanoate metabolism
sdeg00670
One carbon pool by folate
sdeg00785
Lipoic acid metabolism
sdeg01100
Metabolic pathways
sdeg01110
Biosynthesis of secondary metabolites
sdeg01120
Microbial metabolism in diverse environments
sdeg01200
Carbon metabolism
sdeg01210
2-Oxocarboxylic acid metabolism
sdeg01240
Biosynthesis of cofactors
Module
sdeg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sdeg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sdeg_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
sdeg_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
GOM96_00540 (lpdA)
00020 Citrate cycle (TCA cycle)
GOM96_00540 (lpdA)
00620 Pyruvate metabolism
GOM96_00540 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
GOM96_00540 (lpdA)
00640 Propanoate metabolism
GOM96_00540 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GOM96_00540 (lpdA)
00280 Valine, leucine and isoleucine degradation
GOM96_00540 (lpdA)
00310 Lysine degradation
GOM96_00540 (lpdA)
00380 Tryptophan metabolism
GOM96_00540 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
GOM96_00540 (lpdA)
00670 One carbon pool by folate
GOM96_00540 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdeg04147
]
GOM96_00540 (lpdA)
Enzymes [BR:
sdeg01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
GOM96_00540 (lpdA)
Exosome [BR:
sdeg04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
GOM96_00540 (lpdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
FAD_oxidored
GIDA
FAD_binding_3
HI0933_like
AlaDh_PNT_C
3HCDH_N
NAD_binding_8
Thi4
DAO
2-Hacid_dh_C
Lys_Orn_oxgnase
UDPG_MGDP_dh_N
Lycopene_cycl
XdhC_C
Motif
Other DBs
NCBI-ProteinID:
QGW19536
LinkDB
All DBs
Position
109019..110455
Genome browser
AA seq
478 aa
AA seq
DB search
MSQKFDVVVIGAGPGGYVAAIKAAQLGLKTACIEKYQGKDGKTALGGTCLNVGCIPSKAL
LDSSYKYHEAHESFKVHGISTGEVAMDVPTMVARKDQIVKNLTGGVSALMKANGVTVFEG
HGKLLAGKQVEVTGLDGNVQTLAAENVILASGSTPVNIPPAPVDQKVIVDSTGALDFQSV
PKKLGVIGAGVIGLELGSVWARLGAEVTVIEAMDKFLPAADEQIAKEAFKVLTKQGLKIL
LGARLTGSQVSGDQVTVSFTSAEGEQQMTFDKLIVAVGRRPVTTDLLAADAGVDMDERGF
IFVNDQCATSVPGVYAIGDVVRGAMLAHKASEEGVMVAERIAGHKTQMNYDLIPSVIYTH
PEIAWVGKSEQALKAEGVEVNVGVFPFAASGRAMAANDTAGLVKVIADAKTDRVLGVHVM
GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTMSEALHEAALAVNGHAIHIANRKKR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaagttcgacgtagtcgtcatcggggctggccccggtggctatgtggccgct
atcaaggccgcacagctggggttgaaaaccgcctgtatcgagaagtatcagggcaaggat
ggcaagaccgcgctgggcggaacctgcctgaacgttggttgcatcccttccaaggcgctg
ctggacagctcgtacaagtaccatgaggcccacgagagcttcaaagtccacggcatcagc
accggtgaagtggcgatggatgtgccgacaatggtcgcgcgcaaggatcagatcgtcaaa
aacctcaccggcggcgtttctgcgctgatgaaagccaatggcgtaactgtcttcgaaggt
catggcaagctgctggccggtaagcaggtcgaggtgaccgggctggacggcaatgtccag
accctggcggccgagaacgtcattctggcgtccggttccactccggtgaacattccaccg
gctccggtcgaccagaaggtcatcgtcgattccaccggcgccctggatttccagagcgtg
ccgaagaagctgggcgtgatcggcgctggcgttatcggtctggaactgggttcggtatgg
gcgcgtctgggtgccgaagtgactgtaatcgaggcgatggacaagttcctgccggccgcc
gacgagcagatcgccaaggaagccttcaaggtcctgaccaagcaggggctgaagattctg
ctgggtgcgcgtttgaccggttcgcaggtgtccggtgatcaggtcaccgtcagcttcacc
agcgccgaaggcgagcagcagatgacgttcgacaagctcatcgttgctgttggtcgccgc
ccggttactaccgatctgttggctgccgatgcgggtgtcgacatggacgagcgtggcttc
atcttcgttaacgaccagtgcgctaccagcgttccgggcgtctatgcgatcggtgacgtg
gtacgcggcgcgatgttggcgcacaaagcgtccgaagagggcgtgatggttgccgagcgc
atcgccggtcacaagacccagatgaactacgacctgattccgtcggttatctacacccac
ccggaaatcgcttgggtcggcaagagcgagcaagctctgaaggccgaaggcgtcgaagtg
aacgtgggagtgttcccgtttgcggctagcggtcgtgcgatggcggccaacgacactgca
gggctggtcaaggtcatcgccgatgccaagactgatcgcgtgctgggcgttcatgtaatg
gggccgagcgctgccgaactggtccagcagggcgccatcggcatggagttcggcaccagt
gccgaagacctgggcatgatggtgttctcgcacccgacgatgtccgaagcgctgcatgaa
gcggctctggcggtcaatggccatgccattcacatcgccaatcgcaaaaagcgctaa
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