KEGG   Stutzerimonas degradans: GOM96_00540
Entry
GOM96_00540       CDS       T08431                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sdeg  Stutzerimonas degradans
Pathway
sdeg00010  Glycolysis / Gluconeogenesis
sdeg00020  Citrate cycle (TCA cycle)
sdeg00260  Glycine, serine and threonine metabolism
sdeg00280  Valine, leucine and isoleucine degradation
sdeg00310  Lysine degradation
sdeg00380  Tryptophan metabolism
sdeg00620  Pyruvate metabolism
sdeg00630  Glyoxylate and dicarboxylate metabolism
sdeg00640  Propanoate metabolism
sdeg00670  One carbon pool by folate
sdeg00785  Lipoic acid metabolism
sdeg01100  Metabolic pathways
sdeg01110  Biosynthesis of secondary metabolites
sdeg01120  Microbial metabolism in diverse environments
sdeg01200  Carbon metabolism
sdeg01210  2-Oxocarboxylic acid metabolism
sdeg01240  Biosynthesis of cofactors
Module
sdeg_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sdeg_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sdeg_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sdeg_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sdeg00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    GOM96_00540 (lpdA)
   00020 Citrate cycle (TCA cycle)
    GOM96_00540 (lpdA)
   00620 Pyruvate metabolism
    GOM96_00540 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    GOM96_00540 (lpdA)
   00640 Propanoate metabolism
    GOM96_00540 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    GOM96_00540 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    GOM96_00540 (lpdA)
   00310 Lysine degradation
    GOM96_00540 (lpdA)
   00380 Tryptophan metabolism
    GOM96_00540 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    GOM96_00540 (lpdA)
   00670 One carbon pool by folate
    GOM96_00540 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sdeg04147]
    GOM96_00540 (lpdA)
Enzymes [BR:sdeg01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     GOM96_00540 (lpdA)
Exosome [BR:sdeg04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   GOM96_00540 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored GIDA FAD_binding_3 HI0933_like AlaDh_PNT_C 3HCDH_N NAD_binding_8 Thi4 DAO 2-Hacid_dh_C Lys_Orn_oxgnase UDPG_MGDP_dh_N Lycopene_cycl XdhC_C
Other DBs
NCBI-ProteinID: QGW19536
LinkDB
Position
109019..110455
AA seq 478 aa
MSQKFDVVVIGAGPGGYVAAIKAAQLGLKTACIEKYQGKDGKTALGGTCLNVGCIPSKAL
LDSSYKYHEAHESFKVHGISTGEVAMDVPTMVARKDQIVKNLTGGVSALMKANGVTVFEG
HGKLLAGKQVEVTGLDGNVQTLAAENVILASGSTPVNIPPAPVDQKVIVDSTGALDFQSV
PKKLGVIGAGVIGLELGSVWARLGAEVTVIEAMDKFLPAADEQIAKEAFKVLTKQGLKIL
LGARLTGSQVSGDQVTVSFTSAEGEQQMTFDKLIVAVGRRPVTTDLLAADAGVDMDERGF
IFVNDQCATSVPGVYAIGDVVRGAMLAHKASEEGVMVAERIAGHKTQMNYDLIPSVIYTH
PEIAWVGKSEQALKAEGVEVNVGVFPFAASGRAMAANDTAGLVKVIADAKTDRVLGVHVM
GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTMSEALHEAALAVNGHAIHIANRKKR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgagccagaagttcgacgtagtcgtcatcggggctggccccggtggctatgtggccgct
atcaaggccgcacagctggggttgaaaaccgcctgtatcgagaagtatcagggcaaggat
ggcaagaccgcgctgggcggaacctgcctgaacgttggttgcatcccttccaaggcgctg
ctggacagctcgtacaagtaccatgaggcccacgagagcttcaaagtccacggcatcagc
accggtgaagtggcgatggatgtgccgacaatggtcgcgcgcaaggatcagatcgtcaaa
aacctcaccggcggcgtttctgcgctgatgaaagccaatggcgtaactgtcttcgaaggt
catggcaagctgctggccggtaagcaggtcgaggtgaccgggctggacggcaatgtccag
accctggcggccgagaacgtcattctggcgtccggttccactccggtgaacattccaccg
gctccggtcgaccagaaggtcatcgtcgattccaccggcgccctggatttccagagcgtg
ccgaagaagctgggcgtgatcggcgctggcgttatcggtctggaactgggttcggtatgg
gcgcgtctgggtgccgaagtgactgtaatcgaggcgatggacaagttcctgccggccgcc
gacgagcagatcgccaaggaagccttcaaggtcctgaccaagcaggggctgaagattctg
ctgggtgcgcgtttgaccggttcgcaggtgtccggtgatcaggtcaccgtcagcttcacc
agcgccgaaggcgagcagcagatgacgttcgacaagctcatcgttgctgttggtcgccgc
ccggttactaccgatctgttggctgccgatgcgggtgtcgacatggacgagcgtggcttc
atcttcgttaacgaccagtgcgctaccagcgttccgggcgtctatgcgatcggtgacgtg
gtacgcggcgcgatgttggcgcacaaagcgtccgaagagggcgtgatggttgccgagcgc
atcgccggtcacaagacccagatgaactacgacctgattccgtcggttatctacacccac
ccggaaatcgcttgggtcggcaagagcgagcaagctctgaaggccgaaggcgtcgaagtg
aacgtgggagtgttcccgtttgcggctagcggtcgtgcgatggcggccaacgacactgca
gggctggtcaaggtcatcgccgatgccaagactgatcgcgtgctgggcgttcatgtaatg
gggccgagcgctgccgaactggtccagcagggcgccatcggcatggagttcggcaccagt
gccgaagacctgggcatgatggtgttctcgcacccgacgatgtccgaagcgctgcatgaa
gcggctctggcggtcaatggccatgccattcacatcgccaatcgcaaaaagcgctaa

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