Stutzerimonas degradans: GOM96_02205
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Entry
GOM96_02205 CDS
T08431
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg03030
DNA replication
sdeg03430
Mismatch repair
sdeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GOM96_02205
03430 Mismatch repair
GOM96_02205
03440 Homologous recombination
GOM96_02205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdeg03032
]
GOM96_02205
03400 DNA repair and recombination proteins [BR:
sdeg03400
]
GOM96_02205
Enzymes [BR:
sdeg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GOM96_02205
DNA replication proteins [BR:
sdeg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GOM96_02205
DNA repair and recombination proteins [BR:
sdeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GOM96_02205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_5
AAA_22
AAA_16
AAA_18
AAA_14
DUF3646
AAA_2
TIP49
AAA_30
AAA_19
PIF1
TsaE
nSTAND3
AAA_7
TraC-like
Rad17
zf-CXXC
Mg_chelatase
AAA_24
Herpes_Helicase
SKI
Motif
Other DBs
NCBI-ProteinID:
QGW19849
LinkDB
All DBs
Position
complement(486377..488365)
Genome browser
AA seq
662 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGVSSTPCGECSVCREIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPSRGRY
KVYLIDEVHMLSSHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFSLKNMPP
ERVVEHLAHVLGAESVPFEEDALWLLGRAADGSMRDAMSLTDQAIAFGEGRVLAADVRAM
LGTLDHGQVYGVLQALLEGDARALLEAVRQLAEQGPDWAGVLAEMLNVLHRVAIAQALPE
AIDNGQGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRSGFEMVLLRMLAFRP
AESEDAPRTPLKHLGVSPATADSDRAPVAAAATAPASVPAVAVPPVTVPPSVATVTEVVP
PVEEKSTVQTPALPANEPAAPPVIDVPWDESPSTAQATPEVAAVEPVPSPVIAAEQPAPL
APLEDTDDDEPPLSDEDYYEVENQVEAYLDDLVETHAAVASEPLPAAEPATGLAADWLEL
YLKLGLSGLTGSIAANCTLIEVDGDRWLMHLDPAQSALFNATQQRRLNDALDQYHGRKLQ
LEIKLEKPQQETPAQAAARRREERQRAAERSIQADPMVQQLMQQFSAVIRDGTIEPVEHT
ET
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttctagcccgcaaatggcgtccgcgctcgttccgcgaaatggtcggg
cagacgcacgtgctcaaggccctgatcaacgcgctggataatcagcgcctgcaccacgcc
tatctgttcactggcacccgcggcgtgggcaagaccaccatcgcgcggattatcgccaag
tgtctgaactgcgaaactggcgtcagctcgaccccttgtggcgagtgctcggtgtgccgc
gagatcgacgaggggcgcttcgttgatctcatcgaagtcgacgctgcgagccgcaccaag
gtcgaagacacccgcgaactgctggacaacgtgcagtacgcgccgagtcgtggccgctac
aaggtctatctgatcgacgaagtgcacatgctgtcgtcgcactcgttcaatgcgctactg
aagacgctcgaagagccgccgccgcacgtcaagttcctgctggcgaccaccgacccgcag
aaactgcctgtcaccatcctttcgcgttgcctgcagttctcgctgaagaacatgccgccg
gagcgggtggtcgagcatctggctcatgtgctcggtgcggagagcgtaccgttcgaggaa
gatgcactgtggttgctcggccgagcagccgatggctcgatgcgcgatgcgatgagcctg
accgaccaggcgatcgcctttggcgaggggcgggtgctcgccgccgatgtgcgcgcgatg
ctcggcacgctcgatcatgggcaggtctacggtgtattgcaggcgttgctcgaaggtgac
gcgcgcgcactgctcgaagccgtgcgccagctggccgagcaaggcccggactgggccggc
gtgctggcagaaatgctcaatgtgctgcaccgcgtggccattgcccaggcgctgccggaa
gcgatcgataacggccagggcgaccgtgatcgcgtcctcgcgctggctcaggcgttgccc
gccgaggatgtgcagttctattaccagatggggttgatcggccggcgcgacctgccgttg
gcgcccgatccgcgcagtggcttcgagatggtgctgctgcgcatgctggcgttccgtccc
gccgagagcgaagacgcgccgcgaacaccgctaaagcacctgggagtcagcccggccacg
gctgattccgacagggctccggtggccgcagcggccaccgcgcctgcttccgtgcctgcg
gtggctgttccgcctgtcacggtgccgccgagcgttgcaaccgtgaccgaggtcgtcccg
ccggtcgaggagaaatccaccgttcagacaccggcgttgcccgcgaacgaacccgctgcg
ccaccggtcatcgacgtgccctgggacgaatcgccaagtactgcgcaggcgacgcctgag
gtggccgccgtcgaaccagtaccgtcgcctgtcatcgcggccgaacagccggcaccgttg
gctccgctcgaggatacggacgacgacgagccgccgttgagcgacgaggactattacgaa
gtcgaaaaccaggtcgaagcctatctggacgatctggtcgagactcacgccgccgttgcc
agcgaaccgttgccggcggccgaaccggcaaccgggctggctgctgattggctggagctg
tatctcaagctcggcctgtcggggctgaccggcagcattgccgccaactgcacgctgatc
gaggtggacggcgaccgctggttgatgcatctggatccggcgcagagcgcgctgttcaac
gccactcagcagcggcgcctgaacgacgcgctggatcagtaccacgggcgcaagctgcag
ctggagatcaaactggagaaaccgcagcaggaaacgccggcgcaggccgcggcgcgccgt
cgcgaagagcgtcagcgcgcggcggagcgatcgatccaggccgatccgatggtgcagcaa
ttgatgcagcaattctctgccgtgattcgagacggcacgatcgaacctgtagaacacacc
gaaacctga
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