KEGG   Stutzerimonas degradans: GOM96_03055
Entry
GOM96_03055       CDS       T08431                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
sdeg  Stutzerimonas degradans
Brite
KEGG Orthology (KO) [BR:sdeg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sdeg02048]
    GOM96_03055
Enzymes [BR:sdeg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     GOM96_03055
Prokaryotic defense system [BR:sdeg02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   GOM96_03055
SSDB
Motif
Pfam: RE_endonuc ResIII DEAD DUF2433 PhoH
Other DBs
NCBI-ProteinID: QGW20006
LinkDB
Position
697263..700277
AA seq 1004 aa
MKLHFEPDLDYQLQAIEAVCDLFRGQEACRTEFTVTMKAPAPAESAPSDAPQQFALGIAE
SDLGVGNRLTLLDDELHKNLRDVQLRGGLPPSGLLTSGDFTVEMETGTGKTYVYLRSIFE
LNKRYGFTKFVIVVPSVAIKEGVYKSLQITEEHFKSLYAGVPYDYFLYDSNKLGEVRNFA
TSSTIQIMVVTVGAINKKDVNNLYKDSEKTGGEKPIDLIKETRPILIVDEPQSVDGGLKG
AGKTALDAMNPLCTLRYSATHVDKHHMVYRLDAVDAYERRLVKQIEVASATIDDAHNKPF
VRLVAASNKRGTISAKVELDLGTATGGVSTQEVTVYDGDDLEQATKRAVYKDLRIGEINT
AKGEEFVELRYPGGEKYLRIGEVHGGVEPLAIQREMIRRTIKEHLDKEKRFRPMGIKVLS
LFFIDTVERYRQYDADGNPVKGVYATIFEEEYKRFAKHPDYQSLFSEVDFNHSAEEVHNG
YFSIDKKGGWSDTAENNAGNRENAERAYNLIMKDKEKLLTFSTPLKFIFSHSALKEGWDN
PNVFQICTLRDIQSERERRQTIGRGLRLCVNQSGDRVRGFEVNTLTVIATESYEAFAENL
QKEIEEDTGIRFGIVEEHQFAAVAITSAEGESKPLGFEQSKVLWDFLKAQHYVDAKGKVQ
DSLKQALKDGLLQLPPEFEAQRSQIVELLKKVSGRLEIKNADERRAVPTRQTVLQSEEFK
ALWDRIKHQTTYRVDFNNEQLITDCINNLQKAPAVFRPRLQWRKADLAIGKSGVEANEKK
GAYTVTLDESDIELPDILTDLQDRTQLTRRTLVRILTESKRLDDFKRNPQQFIELAGEII
NRCKRLALVDGIRYVKLGEDSFYAQELFEQQELTGYLKNMLLNTEKSVYEHVVYDSAIER
DFAQALEHNDAVKVYAKLPGWFRIPTPLGSYNPDWAILVEQDGAERLYFVVETKSSLFND
DLRPVEEAKIKCGTAHFEVVAENGPNVRFGRASSVDHVIAGVLD
NT seq 3015 nt   +upstreamnt  +downstreamnt
atgaaactgcacttcgagccggatctcgactaccaattacaggctatcgaagcggtatgc
gatctgttccgtggccaggaggcgtgccgtaccgagttcacggtcaccatgaaggcccct
gccccggccgaaagcgccccgagcgacgctccacagcagttcgccctgggaattgccgaa
tccgacctgggcgtgggtaaccgcctgaccctgcttgatgatgagctgcataagaacctt
agggacgtccaactgcgcggcgggctcccgccttccggcttgctcacgtcaggcgacttt
accgtcgagatggagaccggaactggcaaaacctacgtgtacctgcgcagcatcttcgaa
ctgaataaacgctacggctttaccaagttcgtcatcgtggtgccgtcggttgcgatcaag
gaaggcgtctacaagtccctgcagatcaccgaggagcacttcaaaagtctttatgccggc
gtgccctacgactacttcctgtacgactcaaacaagctcggcgaggtacgcaactttgcg
accagttcaaccatccagatcatggtggtcaccgttggcgcgatcaacaagaaggatgtc
aacaacctctacaaggacagcgagaagaccggcggcgaaaagcccatcgacctgatcaag
gagactcgcccgatcctgattgtcgacgagccgcagagcgtcgatggcggccttaaaggg
gccggcaagaccgcattggatgccatgaacccgctgtgcaccctgcgctattccgcaacc
cacgtagacaagcaccacatggtctaccggctggatgcggttgacgcctacgagcgccgc
ctggtcaaacagatcgaagtggcctcggcaacgatagacgatgcccacaacaagccgttt
gtgcggctggtagcggccagcaacaagcgcggcacgatttcagccaaagtcgagctggat
ctgggcacagccacaggtggcgtatccacccaagaggtcacggtttacgacggcgacgat
ctggagcaggcaaccaagcgcgccgtctataaagaccttcgcatcggcgaaatcaacacc
gccaaaggcgaggagttcgtcgagctgcgctacccaggtggcgagaagtacctgcgcatt
ggtgaggtccatggcggcgtggaaccattggcgattcagcgcgaaatgatccgccgcacg
atcaaggagcacctggacaaggaaaagcgcttccgccccatgggcatcaaggtgctgtcg
ctatttttcatcgatacggtcgagcgttatcgccagtacgacgctgacggcaatccagtg
aaaggcgtgtacgcgaccatcttcgaagaagaatacaaacgtttcgccaagcacccggac
taccaaagcctgttcagcgaggtcgacttcaaccacagcgctgaagaggtgcacaacggc
tacttctccatcgacaaaaagggcggctggtctgacaccgctgagaataacgccggcaac
cgagaaaacgctgagcgcgcctacaacctgatcatgaaggacaaagaaaagctgcttacc
ttcagcacaccgctgaaattcatcttttcccactcggcactcaaggaaggctgggacaac
cccaacgtgttccagatctgtacgctgcgtgacattcaatccgagcgtgaacgccgacag
accatcggtcgcggcctgcgcctgtgcgtcaaccaaagcggcgatagggtgcgcggattc
gaggtgaacaccctcaccgttattgccactgagagctatgaagccttcgcagaaaatctg
cagaaagagattgaagaagacacgggtattcgcttcggcatcgtcgaggagcaccagttc
gcggctgttgccatcaccagcgcagagggcgagtccaaaccacttggctttgagcagtcc
aaggtgctctgggatttcttgaaagctcagcattacgtagatgccaagggcaaggtgcaa
gactcgctgaagcaggcactcaaagatggcctgctgcaactcccccccgagttcgaggcg
cagcgttcacaaatagttgagttgttaaagaaagtctccggacgcctggagatcaaaaac
gctgatgagcgccgtgccgtcccgactcgccaaaccgtgctgcaaagcgaagagttcaaa
gccctttgggaccgtatcaagcaccagaccacctatcgcgttgacttcaacaacgaacag
ctgatcaccgactgcatcaacaatctgcagaaagcgccagccgtgttccgccctcgcctg
caatggcgcaaagcggatctagccatcggcaagtcgggcgtggaagccaatgagaaaaaa
ggtgcttacaccgtcaccctggacgagagcgatatcgagctgccggacattctgaccgac
ctgcaggaccgcacccaactcacccgccgcacgctggtgcgcatcctcaccgagagcaag
cgcctggacgatttcaaacgcaacccccagcagtttattgagctggccggcgaaatcatc
aaccgctgcaaacgcctggcgctggtagacggcatcaggtacgtgaagctgggcgaagac
agtttctatgcccaggagctattcgagcagcaagagctaaccggctacctgaagaacatg
ctgcttaacaccgagaagtcagtctacgagcacgtggtttatgactccgcaattgagcgt
gacttcgcgcaagcgctcgaacacaacgacgccgtgaaggtttacgcaaagctgcccggc
tggttccgcatccctaccccgctcggcagctacaaccccgactgggccatacttgttgag
caagacggtgccgaacgcctctactttgtggtcgaaaccaaaagcagcctgttcaatgat
gaccttcgccctgtggaggaagccaaaatcaaatgcgggactgcccacttcgaagtcgtc
gcggagaacgggcccaacgttcgcttcggtcgagcaagcagcgtcgatcatgttattgcg
ggcgtgctggattag

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