Stutzerimonas degradans: GOM96_03825
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Entry
GOM96_03825 CDS
T08431
Name
(GenBank) DctP family TRAP transporter solute-binding subunit
KO
K11688
TRAP-type transport system periplasmic protein
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GOM96_03825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdeg02000
]
GOM96_03825
Transporters [BR:
sdeg02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GOM96_03825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
QGW20149
LinkDB
All DBs
Position
complement(861596..862594)
Genome browser
AA seq
332 aa
AA seq
DB search
MARLTRGITRLLAASALFSVLGAQADPILIKFSHITADSTPKGQGALMFKKLVEERLPGQ
VEVQVFANSSLYGDGKEMEALLMNEVQLLAPAPSKLEQYTKQLQLFDLMFLFDDMAAAQR
FQQSDKGRAMLKSMEDKGITGLAYWLNGMRHFTANKPLREPADARGLKFRVQPSDLQAAQ
YTALRAVPRKMAFAEIYQGLQTGVVNAQDNPWSNIYSQKYHEVQKYITESGHGIGNYLLI
TNTRFWNGLPAEVRGELEAIIDEVTVEVNRQAEALNEKAKQGVIDSGKSEILVLTDEQRA
KWREAVQPAWKKYEDEIGKDLIEAARAANRES
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcacgactcacccgtggcatcacccgtctgctcgccgcttcggcgctgtttagcgtc
ctcggcgcccaggccgatccgatcctgatcaagttctcccatatcaccgccgacagcacg
ccgaagggccagggcgcgctgatgttcaagaagctcgtggaagagcgcctgcccggccag
gtggaagtgcaggtgttcgccaactcctcgctgtacggcgacggcaaggagatggaggca
ctgctgatgaacgaggtgcagctgctggcgccggcaccgtcgaagctcgagcagtacacc
aagcagctgcagctgttcgacctgatgttcctgttcgacgacatggccgcggcgcagcgc
ttccagcagtcggacaaggggcgcgccatgctcaaatccatggaggacaagggcatcacc
ggcctggcctactggctcaacggcatgcgccacttcactgccaacaagccgctgcgcgag
ccggccgacgcccgcgggctgaaattccgcgtacagccctcggacctgcaggccgcccag
tacaccgccctgcgggcggtgccgcgcaagatggccttcgccgagatctaccagggcctg
cagaccggcgtggtcaatgcccaggacaatccctggtcgaacatctacagccagaagtac
cacgaggtgcagaagtacatcaccgagtccggtcacggcatcggcaactatctgctgatc
accaacacccggttctggaacggcctgccggcagaggtgcgcggcgagctggaagcgatc
atcgacgaggtcaccgtggaggtgaaccgccaggccgaggcgctgaacgagaaggccaag
cagggcgtcatcgactcgggcaagagcgagatcctggtgctgaccgacgagcaacgcgcc
aagtggcgcgaggcggtgcagccggcctggaagaagtatgaggacgagatcggcaaggat
ctgatcgaagcggctcgcgcggcgaaccgcgagagctga
DBGET
integrated database retrieval system
