Stutzerimonas degradans: GOM96_04070
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Entry
GOM96_04070 CDS
T08431
Name
(GenBank) DeoR family transcriptional regulator
KO
K02444
DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
Organism
sdeg
Stutzerimonas degradans
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdeg03000
]
GOM96_04070
Transcription factors [BR:
sdeg03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
GOM96_04070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_PafC
HTH_20
MarR
HVO_A0114
HTH_28
HTH_24
GntR
MarR_2
Put_DNA-bind_N
HTH_Crp_2
HTH_36
HTH_5
Rrf2
FeoC
LexA_DNA_bind
HTH_Mga
Fe_dep_repress
HVO_A0261_N
Sigma70_r4
EutK_C
HTH_Tnp_ISL3
DDRGK
HTH_23
WHD_DprA
TFIIE_alpha
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
QGW20197
LinkDB
All DBs
Position
918110..918868
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AA seq
252 aa
AA seq
DB search
MSLAPRQQNILDLVRERGYVSIDELARHFAVTPQTIRRDINQLGEAGLLRRYHGGAAYDS
SVQNTAYSQRARQMRDEKLRIAAAVAARIPDQASLFINIGTTTEAIAQALLNHRDLKIIT
NDLHVASILSTKEDFDVLIAGGSVRSDGGIVGQATADFISQFKVDFALIGISGVDEDGTL
LDFDYQEVRVSQAIIHNARKVFLAADSSKFGRSAMTRLGSLEQIDCLFTDAPPSEVFAEL
LARHKVQVEIAG
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgagcctggcgccccgacagcagaacatcctggatctcgtgcgtgagcgcggctacgtc
agcatcgacgagctggcccggcattttgccgtcacgccgcagaccatccgccgggacatc
aaccagctgggcgaagccgggctgctgcgccgctatcacggcggcgctgcctacgactcc
agcgtgcagaacaccgcctacagccagcgcgcgcggcagatgcgcgacgagaaactgcgc
atcgccgccgcggtggccgcccggattcccgatcaggcctcactgttcatcaacatcggc
accaccaccgaagccatcgcgcaggcgctgctgaaccaccgcgacctgaagatcatcacc
aacgacctgcacgtggcgagcattctcagtaccaaggaggatttcgacgtgctgatcgcc
ggcggcagcgtgcgcagcgacggtggcatcgtcggtcaggctacggcggatttcatcagc
cagttcaaggtggacttcgcgctgatcggcatcagcggcgtcgacgaggacggcaccctg
ctcgacttcgactatcaggaagtccgcgtctcgcaggcgatcatccataacgcccgcaag
gttttcctggcagcggattcgagcaagttcggccgcagcgccatgacgcgcctgggctcg
ctggagcagatcgactgcctgttcactgatgcgccgccgtccgaggtcttcgccgaactg
cttgcacgccacaaggtgcaggtggaaatcgccggatag
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