Stutzerimonas degradans: GOM96_04440
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Entry
GOM96_04440 CDS
T08431
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GOM96_04440 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdeg01007
]
GOM96_04440 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdeg03016
]
GOM96_04440 (lysS)
Enzymes [BR:
sdeg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
GOM96_04440 (lysS)
Amino acid related enzymes [BR:
sdeg01007
]
Aminoacyl-tRNA synthetase
Class II (A)
GOM96_04440 (lysS)
Transfer RNA biogenesis [BR:
sdeg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
GOM96_04440 (lysS)
Prokaryotic type
Other AARSs
GOM96_04440 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QGW20267
LinkDB
All DBs
Position
complement(996958..998460)
Genome browser
AA seq
500 aa
AA seq
DB search
MSEQPLNQHAIQEEENKLIALRKEKLAAVREQGNAFPNDFRRDSYAGDLQKQYAEKTKEE
LEAAAIPVKVAGRIMLNRGAFMVLQDMSGRIQVYVDRKILPAEQLEAVKHFDLGDIIAAE
GTLARSGKGDLYVYMNSVRLLTKSLRPLPDKFHGLTDTEQRYRQRYVDLIMNDEVRETFR
VRSQVIAHIRQFLRERDFLEVETPMLQTIPGGAAAKPFETHHNALDMPMFLRIAPELYLK
RLVVGGFERVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAV
LGTTDVPYGDKVFHFGEPFARLSVFDSILQFNPEISASDLNDLEKARAIAKKAGAKLLGH
EGLGKLQVMIFEELVEHKLEQPTFITEYPFEVSPLARRNDRNPNVTDRFELFIGGREIAN
AYSELNDAEDQAERFHAQVADKDAGDDEAMHFDADFVRALEYGMPPTAGEGIGIDRLVML
LTNSPSIRDVILFPHMRPEV
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacaaccgctgaaccagcacgccatccaagaggaagaaaacaagctgattgcc
ctgcgcaaggaaaagcttgctgccgtgcgcgagcagggcaatgccttccccaatgacttc
cgtcgcgacagctatgcaggcgatctgcagaaacagtacgccgagaagaccaaggaggag
ctggaagcggccgccattccggtcaaggtcgccgggcgcatcatgctcaatcgtggcgcg
ttcatggtcctgcaggacatgagcgggcgcatccaggtctacgtcgaccgcaagattctg
ccggccgagcagctggaagcggtcaagcacttcgacctcggcgacatcatcgccgccgaa
ggcaccctggcacgctccggcaagggcgacctgtacgtctacatgaacagcgtgcgcctg
ctgaccaagtcgttgcgtccgctgccggacaagttccacggtctgaccgacaccgagcaa
cgttaccgccagcgctacgtcgacctgatcatgaacgacgaggtgcgcgagaccttccgc
gtgcgctcgcaggtgattgcgcacatccgtcagttcctgcgcgagcgcgactttctcgaa
gtggaaacgccgatgctgcagaccatccccggtggtgccgcagccaagccgttcgagaca
caccacaacgcgctggacatgccgatgttcctgcgcattgcgccggagctgtacctgaag
cgcctggtggttggtggcttcgagcgtgtgttcgagatcaaccgcaacttccgtaacgaa
ggcgtttcgacccggcataaccccgagttcaccatgctcgagttctaccaggcctacgct
gactacgaagacaacatggacctgaccgaggagctgttccgcgagctggcccaggccgta
ctcggcactaccgacgtgccctatggcgacaaggtgttccatttcggtgagccgttcgcg
cgactgtcggtgttcgattcgatcctccagttcaacccggaaatctcggcctccgatctc
aacgatctggaaaaggcccgggccatcgccaagaaggccggtgccaagctgctcggccat
gagggtctgggcaaactgcaggtgatgattttcgaggagctggtcgagcacaagctggaa
cagccgaccttcatcaccgagtatccgttcgaggtctcgccgctggcccggcgcaacgat
cgcaaccccaacgtcaccgaccgcttcgagctgttcattggtggccgcgagatcgccaac
gcctattccgagctcaacgatgccgaggatcaggccgagcgcttccacgcccaggtggcc
gacaaggacgccggtgacgacgaggcaatgcacttcgacgccgacttcgtccgcgcgctg
gaatacggcatgccgccgaccgccggcgagggcatcggcatcgaccgtctggtgatgctg
ctgaccaactcgccgtcgatccgcgacgtgatcctcttcccgcacatgcgcccggaagtc
tga
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