Stutzerimonas degradans: GOM96_04830
Help
Entry
GOM96_04830 CDS
T08431
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg02020
Two-component system
sdeg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GOM96_04830
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GOM96_04830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdeg03021
]
GOM96_04830
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sdeg02035
]
GOM96_04830
Transcription machinery [BR:
sdeg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GOM96_04830
Bacterial motility proteins [BR:
sdeg02035
]
Flagellar system
Flagellar assembly proteins
Stator
GOM96_04830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
HTH_30
GerE
MarR_2
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
QGW20337
LinkDB
All DBs
Position
complement(1068896..1069642)
Genome browser
AA seq
248 aa
AA seq
DB search
MTAAGLAMYYSKAQAKDAQHRLIDQYAPLVKRIAYHLLARLPASVQVDDLIQAGMIGLLE
AAKKYDAGKGASFETYAGIRIRGTMLDEVRKGDWAPRSVHRNSRMVSEAIRAIEAKTGRD
AKDHEVAAELKLSLDEYYGILGDTLGSRLFSFDDLLQDGEHGELHDDAASTHSEPFRDLE
DERFQQALADAITNLPEREKLVLSLYYDEELNLKEIGQVLGVSESRVSQLHSQCAARLRA
RLGEWRAS
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgctggactcgctatgtattacagcaaggctcaggcgaaggatgcccagcat
cgtttgatcgaccagtatgcgccgctggtcaagcgcattgcctatcacctgctcgcacgg
ctgccggccagcgtccaggtcgacgacctgatccaggccgggatgatcggcctgctggag
gcagcgaagaagtacgacgccggcaagggcgccagcttcgaaacctacgccggtatccgc
atccgcggcaccatgctcgacgaggtgcgcaagggtgactgggcgccacgctcggtgcat
cgcaactcgcgcatggtcagtgaggcgattcgcgccatcgaagcgaaaaccggacgtgac
gctaaagatcacgaggttgcggccgaacttaagctcagcctcgatgagtactacggcatt
ctcggcgataccctgggcagccgcctgttcagcttcgacgacctgttgcaggacggcgaa
catggcgagttgcacgacgatgccgccagcactcattccgagccgtttcgcgatcttgag
gacgagcgtttccagcaggcgctggctgatgccatcaccaacctgcccgaacgcgaaaag
ctggtgctgtcgctgtactacgacgaagagttgaatttgaaggaaatcggtcaggtgctc
ggcgtcagcgagtcgcgggtcagtcagctgcatagccagtgcgccgcccgtctgcgtgcc
cgcctcggcgaatggcgggcgagctga
DBGET
integrated database retrieval system
