Stutzerimonas degradans: GOM96_04960
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Entry
GOM96_04960 CDS
T08431
Symbol
pyrF
Name
(GenBank) orotidine-5'-phosphate decarboxylase
KO
K01591
orotidine-5'-phosphate decarboxylase [EC:
4.1.1.23
]
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg00240
Pyrimidine metabolism
sdeg01100
Metabolic pathways
sdeg01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
GOM96_04960 (pyrF)
Enzymes [BR:
sdeg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.23 orotidine-5'-phosphate decarboxylase
GOM96_04960 (pyrF)
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GFIT
Motif
Pfam:
OMPdecase
TrbH
Motif
Other DBs
NCBI-ProteinID:
QGW20363
LinkDB
All DBs
Position
complement(1093544..1094239)
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AA seq
231 aa
AA seq
DB search
MTCQTPIIVALDFPSQDAALALAQQLDPALCRVKVGKELFTRCGPAVVEALRARGFEVFL
DLKFHDIPNTTAMAVKAAAELGVWMVNVHCSGGLRMMSTCRETLDKIGGPAPLLIGVTVL
TSMEQADLADLGLDIAPQEQVLRLAGLAARAGLDGLVCSAQEAQPLKAQYPQLQLVTPGI
RPAGSAQDDQRRILTPAQAMAAGSDYLVIGRPIAQAADPAQALAAVVAELG
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgacttgccagactccgatcatcgttgcgctcgactttccttcgcaggacgccgccctg
gcgctggcgcagcagctcgatcccgcgctgtgccgggtcaaggtcggcaaggaactgttc
acccgctgcggccctgcggtggtcgaggcgctgcgcgcgcgcggcttcgaggtgttcctc
gacctcaagttccacgacattcccaacaccacggcgatggcggtcaaggcggccgccgag
ctgggcgtgtggatggtcaacgtgcactgttcgggcggtctgcgcatgatgtcgacctgt
cgcgagacgctggacaagatcggcgggccggcgccgctgctgatcggcgtgactgtgctg
accagcatggaacaggccgatctggccgatctcggtctggacatcgcgccgcaggagcag
gtgctgcgtctggccggcctggccgcgcgagccggtctcgacggcctggtctgctcggca
caggaagcgcagccgttgaaggcgcaatacccgcagctgcagctggtgacgcccggcatt
cgtccagccggtagtgcccaggacgaccagcggcgcatcctcaccccggcgcaggcgatg
gccgccggatcggattacctggtcatcggtcgcccgatcgcccaggccgccgacccggca
caggcgctggccgcggtcgtcgccgagctgggttga
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