Stutzerimonas degradans: GOM96_05120
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Entry
GOM96_05120 CDS
T08431
Symbol
rluC
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
sdeg
Stutzerimonas degradans
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdeg03009
]
GOM96_05120 (rluC)
Enzymes [BR:
sdeg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
GOM96_05120 (rluC)
Ribosome biogenesis [BR:
sdeg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GOM96_05120 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
YqgB
Motif
Other DBs
NCBI-ProteinID:
QGW20393
LinkDB
All DBs
Position
complement(1122613..1123566)
Genome browser
AA seq
317 aa
AA seq
DB search
MTITPSQTSGVQMLEVAPELAGQRIDNFLRTQLRGVPKTLIYRILRKGEVRVNKGRVKPE
YKLQAGDLVRVPPLRQAERDEPEPLAQGLLERLEAAIVYEDKALIVLNKPAGIAVHGGSG
LSYGVIEALRQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHQALRGDGVDKRYMA
LVRGRWETSKKQVNAPLLKNTLRSGERMVEVTEDGKEALTLFRVLRRFGDFATLVEARPV
TGRTHQIRVHARHAGHSIAGDSKYGDEEFTREIRELGGKRLFLHAYALRVPLPDGGELAL
EAPVDEVWARTLEKLGE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaccattaccccctcccagacctccggcgtgcaaatgctcgaggtcgcgccggaactt
gccggccagcgcatcgacaattttctccggacccagctcagaggcgttcccaagacgctg
atctaccgcattttgcgcaaaggcgaggtgcgggtgaacaagggccgggtcaagcccgag
tacaagctgcaggcgggcgacctggtgcgcgtgccgccgctgcgccaggccgagcgcgac
gaacccgagccgttggcgcagggcctgctcgagcggctcgaggcggcaatcgtctatgag
gacaaggcgctcattgtgctgaacaagccagccggcatcgcggtgcacggtggcagcggg
cttagttacggcgtgatcgaggccttgcgccagttgcgaccggatgccaaggagctcgaa
ctcgtgcaccgtctggatcgcgatacgtccgggcttctgatgattgcgaagaagcgcagc
atgctgcgtcatctgcatcaggcgctgcgcggtgatggtgtggacaagcgctacatggcg
ctggtgcgtggccgatgggaaacctcgaagaagcaggtgaatgcgccgctactgaagaat
acgctgcgctctggcgagcgcatggtcgaggtgaccgaggacggcaaggaggcgctgacg
ctttttcgtgttctgcgacgcttcggtgacttcgcgacgctcgtcgaggcccgaccggtg
accggacgcacccatcagatccgcgtgcatgcccgccatgccggacatagcatcgccggt
gacagcaaatacggcgatgaagagttcacccgcgagattcgtgaacttggcggcaagcgg
ctgtttttgcacgcctatgcgctgcgggtgccgttgccggatggcggcgagctggcgctg
gaggcgcccgtggacgaagtctgggcgcggacgctggagaagcttggtgagtag
DBGET
integrated database retrieval system
