Stutzerimonas degradans: GOM96_05340
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Entry
GOM96_05340 CDS
T08431
Name
(GenBank) response regulator
KO
K07678
two-component system, NarL family, sensor histidine kinase BarA [EC:
2.7.13.3
]
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GOM96_05340
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sdeg01001
]
GOM96_05340
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sdeg02022
]
GOM96_05340
Enzymes [BR:
sdeg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
GOM96_05340
Protein kinases [BR:
sdeg01001
]
Histidine kinases
NarL family
GOM96_05340
Two-component system [BR:
sdeg02022
]
NarL family
BarA-UvrY (central carbon metabolism)
GOM96_05340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
HisKA
sCache_4
HAMP
Hpt
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QGW20431
LinkDB
All DBs
Position
1175350..1178136
Genome browser
AA seq
928 aa
AA seq
DB search
MLKDVGIRGRVLVLTLLPSTLLAIALGAYFTWMQLSEMRHQLDERGVLIAEQLAPLAAPA
MNLGYDKRLQRILAQVLDQNDVRAVAILDAERNARAHVGPRMLTPSPPGDPEGLTRVSSL
DYTRILMPVLQQHLNLGEEARGNGNALIGWLELELSHHGTLLRGYRSLFTSLLLVGAGLI
VTALLALRMSRTISQPLQRVQLAVTQLKDGHLETRLPALGSHEMDELASGINRMAEALLS
AREELQQSIDQATADVQQNLETIEIQNIELDLARKEALEASRIKSEFLANMSHEIRTPLN
GILGFTHLLQKSDLTPRQQDYLSTIEKSADNLLGIINEILDFSKIEAGKLVLDSVPFNLR
DLIEDTLTILAPAAHTKQLELVSLVYRDTPLSLVGDPQRLKQVLTNLVSNAIKFTNEGTI
AVRAMIEEESAERAQLRISVQDTGIGLTDQDLRALFQAFSQADNSLSRQPGGTGLGLVIS
KRLIEQMGGEIGVDSIPDEGSEFWITLSLPKARDDIEDQPPAALLGRRVALLEQHPLARQ
SLQHQLESCGLSVQNFDNLEQLQRSVASQRDSNVPIDLAVLGITTRELAPAQLGQLLHEF
DTLDCKCVVLCPTTEQPLFSDTLPDHHSHAQLQGKPARTRKLQRVLLELLRPAQAMAPSV
QPVNGRVPQLLCVDDNPANLLLVETLLSDLGAAVVAVDNGPDALEAVKRHSFDLVLMDVQ
MPGMDGRQTTEAIRQWENDTGALPLPIVALTAHALANEKRALLQAGLDDYLTKPISERQL
AQVVLKWTGLTLRSQPQTQPPSPPRTVPAEAPPALPEQVFPVLDEEEGLRLAAGKADLAG
ELLSMLLGSLDADRVAIRQARQAGDRQLQIERVHRLHGATRYCGVPQLRNACLQSETLLK
QNSPAAEAALDELDAAIERLGHAARVAS
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaaagacgtaggaatccgaggccgcgtactggtgctcacgctgctgccgagcacc
ctgctcgccatcgcgctgggcgcctacttcacctggatgcagctctccgagatgcgtcac
cagctcgacgaacgcggcgtgctgatcgccgaacagctggcgccgctggccgctccggcg
atgaacctgggctacgacaaacgcctgcagcgcatcctggcgcaggtgctcgaccagaac
gacgtccgcgcggtagccatcctcgacgctgaacgtaacgcgcgcgcgcacgtcggcccg
cgcatgctcaccccctcgccgcccggcgacccggagggcctgacccgggtcagcagcctg
gactacacgcgcatcctcatgccggtgctgcagcagcacctgaatctcggcgaggaggcg
cgcggcaacggtaatgcgctgatcggctggctggagctggagctgtcgcaccacggcacg
ctgctgcgcggctatcgcagcctgttcaccagcctgctgctggtcggcgccggcctgatc
gtcaccgccctgctggcgctgcgcatgagccgcaccatcagccagccgctgcagcgcgtg
cagctggccgtcacccagctcaaggacggccatctggaaacacgcctgccggccctgggc
agccacgagatggacgagctggcctcgggcatcaaccgcatggccgaggcgctgctcagc
gcccgcgaggagctgcagcaaagcatcgaccaggccaccgccgacgtgcagcagaatctg
gaaaccatcgagatccagaacatcgagctggacctggcgcgcaaggaggcgctggaagcc
agccggatcaagtccgagttcctcgccaacatgagccacgagatccgcaccccgctcaac
ggcatcctcggcttcacccacctgctgcagaaaagcgacctcaccccgcgccagcaggac
tacctgtcgaccatcgagaaatccgccgacaacctgctgggcatcatcaacgagattctc
gatttctcgaagatcgaggccggcaagctggtgctcgacagcgtgccgttcaacttgcgc
gacctgatcgaggacaccctgaccatcctcgcgccggccgcgcacaccaagcagctcgag
ctggtcagcctggtctaccgcgacaccccgctgtcgctggtcggcgacccgcagcggctc
aagcaggtgctgaccaatctggtcagcaatgccatcaagttcaccaacgaaggcaccatc
gccgtacgcgcgatgatcgaggaagaaagcgccgagcgcgcacagctgcgcatcagcgtg
caggacaccggcatcggcctcaccgatcaggacctgcgggcgctgttccaggccttcagc
caggccgacaactcgctgtcgcgccagcccggcggcaccggcctggggctggtgatctcc
aagcgcctgatcgagcagatgggcggcgagatcggcgtcgacagcattccggatgagggc
tcggaattctggatcaccctgagcctgcccaaagcgcgcgacgacatcgaggaccagccg
ccggccgcgctgctcggacgccgggtggcgctgctcgaacagcatccgctggcgcgtcaa
tcgctgcagcaccagctcgaaagctgcggactgagcgtgcagaacttcgacaatctggag
cagttgcagcgcagcgtcgccagtcagcgtgacagcaacgtgccgatcgacctcgccgta
ctcggcatcaccacccgcgaactggcgccggcgcagctgggccagctactccacgaattc
gacacgctggattgcaagtgcgtggtgctctgcccgaccaccgaacaacccttgttcagc
gacacgttgccggatcaccacagccacgcccagctgcagggcaagccggcgcgcacgcgc
aagctgcagcgcgtactgctggagctgctgcgcccggcgcaagcgatggcgccgtccgtt
caaccggtcaatggacgggtgccgcagctgctctgcgtggatgacaacccggccaacctg
ctgctggtggaaacgctgctgagcgatctcggcgccgcggtagtcgccgtggacaacggc
cccgatgcgctggaggcggtcaagcggcacagcttcgatctggtcctgatggacgtgcag
atgcccggcatggacggccggcagaccaccgaggcgatccgccagtgggaaaacgatacc
ggcgcgctgccgctaccgatcgtcgccctcaccgcgcatgcgctggccaacgaaaaacgc
gccctgctgcaagccgggctggacgattacctgaccaagccgatcagcgaacgccaactg
gcgcaggtggtgctcaagtggaccggcctgaccctgcgcagccagcctcagacgcagccg
ccgagtccgccgcgcaccgttccggctgaagccccgccagcgctaccggagcaggtgttc
ccggttctcgacgaggaggaaggcctgcgcctggccgccggcaaggccgatctcgctggc
gagttgctgagcatgctgctcggctcgctggatgccgaccgcgtggcgatccgccaggcg
cgccaggccggcgaccgccagctgcagatcgagcgcgtgcatcgcctgcacggcgccacc
cgctactgcggcgtaccgcagctgcgcaacgcctgtctgcagagcgagacgctgctcaag
cagaacagcccggctgccgaggcggccctcgacgagctggacgccgccatcgaacgactg
gggcacgccgcccgcgtcgccagctga
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