Stutzerimonas degradans: GOM96_05635
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Entry
GOM96_05635 CDS
T08431
Symbol
alaS
Name
(GenBank) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GOM96_05635 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdeg01007
]
GOM96_05635 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdeg03016
]
GOM96_05635 (alaS)
Enzymes [BR:
sdeg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
GOM96_05635 (alaS)
Amino acid related enzymes [BR:
sdeg01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
GOM96_05635 (alaS)
Transfer RNA biogenesis [BR:
sdeg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
GOM96_05635 (alaS)
Prokaryotic type
GOM96_05635 (alaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
CorA
TolA_bind_tri
Motif
Other DBs
NCBI-ProteinID:
QGW20481
LinkDB
All DBs
Position
complement(1231143..1233767)
Genome browser
AA seq
874 aa
AA seq
DB search
MKSAEIREAFLSFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRA
TTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITYAWEFLTSEKWLN
LPKEKLWVTVYATDDEAYDIWTKDVGIPAERMVRIGDNKGAPYASDNFWAMGDTGPCGPC
TEIFFDHGEHIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLE
RISAVLQHVNSNYEIDLFQSLLNAAAEAIGCANEGQASLKVVADHIRSCGFLIADGVTPS
NEGRGYVLRRIIRRACRHGNKLGARGSFFYRIVAALVAEMGEAFPELKQQQAHIERVLKN
EEEQFAKTLEQGLKILEQDLAELSGSIIPGDVVFKLYDTYGFPVDLTADIARERELTLDE
EGFEREMQAQRERARSASAFGMDYNSLVKVEGETRFTGYQGTVGQGTVLALFKEGMAVDS
LSAGDEGVVVLDQTPFYAESGGQVGDCGYLAAEGLRFDVRDTSKAGGAFLHHGILDSGNL
RVGASVDATVDASVRQATALNHSATHLLHAALRETLGEHVSQKGSLVDSQRLRFDFSHFE
AIKPAQLKALEDKVNAEIRRNTAVDIEETDIDTAKAKGAMALFGEKYGDTVRVLSMGGGF
SVELCGGTHVSRTGDIGLFKIVSEGGVAAGVRRIEAVTGAQALAYLNDAEEQLKEAASLV
KGSRENLLDKLSGVLERNRQLEKELEQLKAKAASAAGDDLAGSAIELQGVRVLASRLDGL
DGKALLALVDQLKNKLGSAVILLGGVQDDKVVLVAGVTQDLTARFKAGDLMKQAAAAVGG
KGGGRPDMAQGGGSEPGRLDDALGLARSFVEQGL
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcgcagaaatccgtgaagccttcctgagcttcttcgaagagaaggggcacacc
cgtgtggcctccagttcgttgattccggcgaacgacccgacgctgctgttcaccaacgcc
ggcatgaaccagttcaaggactgcttcctcggcctggagaagcgcgcctatacccgcgcc
actaccagccagaagtgcgtgcgtgccggcggcaagcacaacgacctggaaaacgtcggc
tacaccgcgcgtcaccacaccttcttcgagatgctcggcaacttcagcttcggcgattat
ttcaagcgcgacgccattacctatgcctgggagttcctcacctccgagaagtggctgaac
ctgcccaaggaaaagctctgggtgaccgtctacgccaccgacgacgaggcctacgacatc
tggaccaaggacgtcggcattcccgccgagcgcatggtgcgcatcggcgacaacaagggt
gcgccctacgcctccgacaacttctgggcgatgggcgataccggcccgtgcggcccctgc
accgagatattcttcgaccatggcgagcacatctggggcggcccgcccggctccccggaa
gaggacggtgaccgctacatcgaaatctggaacaacgtgttcatgcagttcaaccgcacc
gcggacggcgtcctgcacccgctgccggcgccgagcgtggataccggcatggggctggag
cgcatcagtgccgtgctgcagcacgtgaactccaactacgaaatcgacctgttccagagt
ctgctcaacgcggcagctgaggccatcgggtgcgccaacgaaggccaggcctcgctcaaa
gtggtcgctgaccacatccgctcctgcggctttctgatcgctgacggggtgaccccgtcc
aacgaagggcgcggctacgtgctgcggcgcatcattcgccgcgcctgccgccacggcaac
aagctgggtgccagaggtagcttcttctatcgcatcgttgcggcgctggttgccgaaatg
ggcgaggctttccctgagctgaaacagcagcaggcgcatatcgaacgcgtgctaaaaaac
gaggaagagcagtttgccaagaccctcgagcagggactgaagattctcgagcaggacttg
gccgaactgtcgggcagcatcattccgggcgatgtggtgttcaagctgtacgacacctat
ggcttcccggtggacctgaccgcggatatcgcccgcgaacgggagcttaccctcgatgag
gaaggcttcgagcgcgaaatgcaggcccagcgcgagcgcgcccgctcggccagtgccttc
ggcatggactacaacagcttggtcaaggtcgagggcgaaacccgtttcacgggctaccag
ggtacggtcggtcagggcacggtgttggcgttgttcaaggaaggcatggcggtggatagc
ctgagcgctggcgacgagggcgtggtggttctagaccagacgccgttctatgccgaatcg
ggcggtcaggtcggtgactgcggctatctcgcggccgaaggcctgcgcttcgatgtgcgc
gacaccagcaaggccggcggggcgtttctgcaccacggcatactcgacagcggcaacctg
cgcgtcggcgccagcgtcgatgcgactgttgacgcctcggtgcgccaggccacggcgctc
aatcattcggcaacccatttgctgcatgccgcactgcgcgagacgctcggtgagcatgtg
agtcagaagggatcgctggtagatagccagcgactgcgtttcgatttcagccatttcgag
gcaatcaagcccgcacaactcaaggccctcgaagacaaggtcaacgccgagatccgccgc
aataccgcagtggatatcgaggaaaccgacatcgataccgccaaggcgaagggtgcgatg
gcgctgttcggcgagaagtacggcgacactgtgcgggtgctgagcatgggtggcggtttc
tcggtggaactgtgcggcggcacccacgtgtcgcgtacaggcgacatcggcctgttcaag
atcgtcagcgagggtggcgtagctgccggagtccggcgtatcgaggcggtaactggggcg
caggcgctggcatatctgaacgatgccgaggagcagctgaaagaagcggcgagcctggtc
aagggcagccgggagaacctactcgacaagctgtccggtgtgcttgagcgcaaccgtcag
ctggaaaaggagctggagcagctcaaggccaaagcggctagtgctgctggcgatgatctt
gccggttcggcaatcgagctgcagggcgtgcgagtgctggcgtcgcgcctggatgggctg
gatggcaaggctctgctcgcgctggtcgatcagctcaaaaacaagcttggcagtgcggtg
atcctgctcggtggcgtgcaggacgacaaagtggtcctggtggcgggcgtgacccaggat
cttacggctcgattcaaagcgggcgacctcatgaagcaggccgcggcagcggtgggcggc
aagggcggcgggcgtccggatatggcccaggggggcggtagcgagcctgggcggctggac
gatgccctcggtcttgcgcgctctttcgtcgagcaggggctctga
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