Stutzerimonas degradans: GOM96_07080
Help
Entry
GOM96_07080 CDS
T08431
Symbol
rlmE
Name
(GenBank) 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
sdeg
Stutzerimonas degradans
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdeg03009
]
GOM96_07080 (rlmE)
Enzymes [BR:
sdeg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
GOM96_07080 (rlmE)
Ribosome biogenesis [BR:
sdeg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GOM96_07080 (rlmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
PCMT
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
QGW20744
LinkDB
All DBs
Position
complement(1530504..1531136)
Genome browser
AA seq
210 aa
AA seq
DB search
MARSKTSPRWLKEHFDDPYVKMAQRDGYRSRASYKLLEIQDKDRILRPGMTVVDLGAAPG
GWSQVTSRVIGDKGRLIASDILPMDSIADVTFIQGDFTEDEVFAQILEAIGEHPVDLVIS
DMAPNMSGVRASDQSRAMFLCELALDLATRVLRPGGDFLIKIFQGEGFDAYLKDVRQNFD
KVQMRKPLSSRDRSREQYLLARGFKGQQGK
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
ttggcacgctccaagaccagcccgcgttggctgaaagaacatttcgacgatccctacgtg
aagatggcgcagagggacggctaccgctcccgcgccagctacaagctactggagattcaa
gataaggatcgaatcctgcgtccgggcatgaccgtagttgatctcggcgcggcgcccggc
ggttggtcacaggtcaccagtcgagttattggcgacaaggggcggctcatcgcctccgat
atcctaccgatggacagcatcgccgatgtgaccttcattcaaggcgacttcaccgaggac
gaggtgttcgcgcagattctcgaggccatcggcgagcatccggtggaccttgttatctcc
gatatggcccccaacatgagtggagtgagggcgtccgatcagtcgcgcgcgatgtttctc
tgcgagctggcactggatctcgccacgcgtgtactgcgccccggtggcgattttctgatc
aagatattccaaggcgaaggcttcgatgcctatttgaaggatgtgcggcagaacttcgac
aaggtgcagatgcgcaagccactgtcctcccgtgaccgctcgcgtgagcaatatctgctg
gcgcgaggtttcaaggggcagcagggcaagtga
DBGET
integrated database retrieval system
