Stutzerimonas degradans: GOM96_07100
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Entry
GOM96_07100 CDS
T08431
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg00220
Arginine biosynthesis
sdeg00240
Pyrimidine metabolism
sdeg00250
Alanine, aspartate and glutamate metabolism
sdeg01100
Metabolic pathways
sdeg01110
Biosynthesis of secondary metabolites
sdeg01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
GOM96_07100 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
GOM96_07100 (carB)
00220 Arginine biosynthesis
GOM96_07100 (carB)
Enzymes [BR:
sdeg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
GOM96_07100 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
QGW20748
LinkDB
All DBs
Position
complement(1532442..1535663)
Genome browser
AA seq
1073 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALKEEGFRVILVNSNPATIMTDPAM
ADATYIEPIKWATVAKIIEKERPDALLPTMGGQTALNCALDLEKHGVLEKFGVEMIGANA
DTIDKAEDRSRFDKAMKNIGLACPVSGIAHNMDEAYGVLDKVGFPCIIRPSFTMGGTGGG
IAYNREEFEEICARGLDLSPTSELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPM
GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELQNDITGGRTPASFEPAIDYVVTKVP
RFAFEKFPKADARLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGATGFDPKLNLADVEA
ESTLKRELTVPGAERIWYVADAFRAGKSVEDVFALTKIDPWFLVQIEDLVKEEEQVKTLG
LSSIDRDLMYKLKRKGFSDARLAKLLGVTEKNLRSHRHKLKVLPVYKRVDTCAAEFATDT
AYMYSTYEEECEANPSSRDKIMILGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKICRALEEAGVPI
IGTSPDAIDRAEDRERFQQMVQRLNLRQPQNATARSEEEAIAASKAIGYPLVVRPSYVLG
GRAMEIVYEEEELKRYMREAVQVSNDSPVLLDHFLNCAIEVDVDAVCDGEQVVIGAIMQH
IEQAGVHSGDSACSLPAYSLPQHIQDEIREQVRKMALELDVVGLMNVQMAVQGEDIYVLE
VNPRASRTVPFVSKCIGESLAKVAARVMAGKTLAEIGFTKEIIPPFFSVKEAVFPFAKFP
GVDTILGPEMKSTGEVMGVGDSFAEAFAKAQLGASEILPTSGCAFISVREDDKPYVEQVA
RDLIGLGFEVVATAGTARIIEAAGLPVRRVNKVTEGRPHVVDMIKNDEVTLIINTTEGRQ
SIADSYSIRRNALQHKICITTTIAGGQAICEALKFGPEKTVRRLQDLHAGIHA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagatatcaaaagcatcctgatcctcggtgccggccccatcgttatc
ggccaggcctgtgagttcgactattccggcgcgcaggcctgcaaggcgcttaaggaagaa
ggcttccgcgtcatcctggtgaattccaacccggccaccatcatgaccgacccggcgatg
gccgacgccacctatatcgagccgatcaagtgggccaccgtggccaagatcattgagaag
gagcgtcccgacgcgctgctgccgaccatgggtggccagaccgcgctgaactgcgcgctg
gatctggaaaagcacggcgtgctggagaagttcggcgtcgagatgatcggtgccaatgcc
gacaccatcgacaaggccgaggatcgctcgcgcttcgacaaggcgatgaagaacatcggc
ctggcgtgcccggtttccggcatcgcgcacaatatggacgaagcctacggcgtgctcgat
aaggtcggcttcccctgcatcatccgtccgtcgttcaccatgggcggcaccggcggcggc
atcgcctacaaccgtgaggagttcgaggagatctgtgcgcgcggcctggatctgtcgccg
accagcgagctgctgatcgacgagtcgctgatcggctggaaggaatacgagatggaggtg
gtccgcgacaagaaggacaactgcatcatcgtctgctccatcgagaacttcgatccgatg
ggcgtgcacaccggcgactcgatcaccgtggctccggcacagacgctgaccgacaaggaa
taccagatcatgcgcaacgcctccctggcggtgctgcgcgagatcggcgtagaaaccggc
gggtccaacgtgcagttcggtatttgcccgaacaccggccgtatggtcgtcatcgagatg
aacccgcgtgtgtcgcgttcctcggcgctggcctccaaggccaccggcttccccatcgcc
aagatcgccgccaagctggccgtcggctataccctcgacgagctgcagaacgacatcact
ggcggccgcaccccggcctccttcgagccggcgatcgactacgtggtgaccaaggtcccg
cgtttcgccttcgagaaattccccaaggcggatgcccgtctgactacccagatgaagtcg
gtgggtgaagtcatggccatcggccggaccttccaggaatccatgcagaaagccttgcgt
ggtctggaggttggcgccaccggcttcgatccgaagctgaacctcgccgatgtcgaggcc
gagagcacgctcaagcgcgagctgaccgtgccgggtgccgagcgcatctggtacgtcgct
gacgccttccgcgctggcaagagcgtcgaggatgtgtttgccctgaccaagatcgacccc
tggttcctcgtgcagatcgaggatctggtcaaggaagaagagcaggtcaagaccctgggc
ctgtccagcatcgatcgcgatctgatgtacaagctcaagcgcaagggcttctccgacgcg
cgcctggccaagctgctcggtgttaccgagaagaacctgcgcagccaccgccacaagctc
aaggtgctgccggtctacaagcgcgtcgacacctgcgccgccgaattcgccaccgacacc
gcctacatgtactcgacctatgaggaagagtgcgaagccaacccgtcgagccgcgacaag
atcatgattctcggtggtggccccaaccgcatcggccagggcatcgagttcgactactgc
tgcgtgcacgccgcgctggccatgcgtgaagacggttacgagaccatcatggtcaactgc
aacccggaaaccgtctccaccgactacgacacctcagaccggctgtacttcgagccggtg
acccttgaagacgtgctggagatcgtccgcgtcgagcaacccaagggcgtgatcgtgcag
tacggtggccagacgccgctgaagatttgccgtgccctggaagaggccggcgtgccgatc
atcggcaccagcccggacgccatcgatcgcgccgaagaccgcgagcgcttccagcagatg
gtgcagcgcctgaacctgcgccagccgcagaacgccaccgcacgcagcgaggaagaagcc
atcgcggcgtccaaggccatcggttatccgctggtggtgcgtccgtcctacgtactcggc
ggccgcgcgatggagatcgtctacgaggaagaggagctcaagcgctacatgcgcgaagcg
gtgcaggtgtccaacgacagcccggtgctgctcgatcacttcctcaactgcgccatcgag
gtggacgtggatgcggtgtgcgacggcgagcaggtggtgatcggcgcgatcatgcagcac
atcgaacaggccggcgtgcactccggtgactccgcctgttcgctgccggcctattcgctg
ccgcagcacattcaggacgagatccgcgagcaggtgcgcaagatggccctcgagctcgac
gtggtcggcctgatgaacgtgcagatggcggtgcagggcgaagacatctacgtgctggaa
gtgaacccgcgtgcttcgcgcaccgtgccgttcgtttccaagtgtatcggtgagtcgttg
gccaaggttgccgcgcgcgtcatggctggcaagacgctggccgagatcggcttcaccaag
gaaatcatcccgccgttcttcagcgtcaaggaagcggtattccccttcgccaagttcccc
ggcgtggataccatcctcggcccggaaatgaagtccaccggcgaagtgatgggcgttggc
gacagctttgccgaggccttcgcgaaggcccagctgggtgccagcgaaatcctgccgact
tccggttgcgcattcatcagcgtgcgcgaagacgacaagccctacgtcgagcaggtcgcc
cgcgatctgatcgggctgggcttcgaagtggtcgcaaccgccggtacggcgcgcatcatc
gaggccgccggattgccggtgcgccgcgtgaacaaggtgaccgaggggcggccccacgtg
gtcgacatgatcaagaatgacgaggtcacattgatcatcaacaccaccgaaggacggcag
tcgatcgccgattcgtattccattcgccgcaatgccctgcagcacaagatctgcatcacc
actaccattgccggtggtcaggcgatctgtgaggcgctcaagttcggtcccgagaagacc
gtgcgccgcttgcaggatctccatgcaggaatccacgcatga
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