Stutzerimonas degradans: GOM96_07680
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Entry
GOM96_07680 CDS
T08431
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GOM96_07680 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdeg03032
]
GOM96_07680 (dnaB)
Enzymes [BR:
sdeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
GOM96_07680 (dnaB)
DNA replication proteins [BR:
sdeg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GOM96_07680 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
AAA_22
divDNAB
nSTAND3
AAA_24
KTI12
GvpD_P-loop
Gal-bind_lectin
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QGW20856
LinkDB
All DBs
Position
complement(1662961..1664355)
Genome browser
AA seq
464 aa
AA seq
DB search
MNDISVPQQYDLETAALKVPPHSIEAEQAVLGGLMLDNNAWERVLDQVSDGDFYRHDHRL
IFRAIYKLAERNSPFDVVTLSEQLDKEGQLPQVGGLAYLGELAKNTPSVANIKAYAQIIR
ERATLRQLIGISNEIADSAYAPQGRTGEEILDEAERLIFQIAEARPKTGGPVGINDILVK
AIDRIDTLFNAGEAITGLSTGFTDLDEATSGLQPADLIIVAGRPSMGKTTFAMNLVENAV
LRTDKAVLVFSLEMPADSIVIRMLASLGRIDQTKVRAGKLDDDDWPRLTSAVNLLNDRKL
FIDDTAGISPSEMRARTRRLAREHGEIAMIMVDYLQLMQIPGSSGDNRVNEISEISRSLK
GLAKEFNCPVIALSQLNRSLEQRPNKRPVNSDLRESGAIEQDADIIMFVYRDEVYHPETE
YKGVAEIIIGKQRNGPIGTTRLAFLGKYSRFENLAPGSYQFDDE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacatcagtgtgccccagcagtacgacttggaaaccgccgcgctcaaggtgccg
ccgcactccatcgaggccgagcaggccgtgctgggcggcctgatgctggacaacaacgcc
tgggagcgcgtactcgaccaggtctccgatggcgatttctaccgccacgatcatcgtctg
atcttccgggccatctacaagctggccgagcgcaactcgccgttcgacgtggtgacgctg
tccgagcagctggacaaggaagggcaactgccgcaggtcggtggtctggcctatctgggc
gagctggcgaagaacacgccgtcggtggcgaacatcaaggcctacgcgcagatcatccgc
gaacgcgccacgttgcggcagctgatcggtatcagcaacgagatcgccgacagcgcctac
gcaccgcaagggcgcaccggcgaggaaattctcgatgaagccgagcggctgatctttcag
atcgccgaggcgcggccgaaaaccggcggcccggtgggcatcaacgacatcctagtcaag
gccatcgaccgcatcgatacgctgttcaatgccggcgaggcgatcaccggcctgtccacc
ggcttcaccgatctggacgaagccaccagcggcctgcagcccgccgatctgatcatcgtt
gccggccgtccgtcgatgggtaagaccaccttcgcgatgaacctcgtggagaacgccgtg
ctgcgtaccgacaaggctgtgctggtgttttccctggagatgcccgctgactccattgtc
attcgtatgctcgcctcgctcgggcgtatcgaccagaccaaggtccgcgcgggcaagctg
gatgatgacgactggccgcggctgacctcggcagtgaacctgctcaacgaccgcaagctg
ttcatcgacgataccgcgggtatcagcccctccgagatgcgggcgcgtacccgccggctg
gcgcgcgagcacggtgagatcgccatgatcatggtcgactacctgcagctgatgcagatt
ccgggttccagcggtgacaaccgggtcaacgagatttccgagatttcccgctcgctcaaa
ggcctggcgaaggaattcaactgtccggtcatcgcgctgtcgcagctcaaccgttcgctg
gagcagcgccccaacaagcgtccggtgaactccgacctgcgcgagtcgggcgccatcgag
caggacgccgacatcatcatgttcgtctaccgggacgaggtgtatcacccggaaaccgaa
tacaaaggtgtcgccgagatcatcatcggcaagcagcggaacggcccgatcggcaccacc
cgcctggcattcctcggcaagtattcgcgcttcgagaacctcgcgccgggcagctatcag
ttcgacgacgagtaa
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