Stutzerimonas degradans: GOM96_07880
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Entry
GOM96_07880 CDS
T08431
Name
(GenBank) geranyl transferase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg00900
Terpenoid backbone biosynthesis
sdeg01100
Metabolic pathways
sdeg01110
Biosynthesis of secondary metabolites
Module
sdeg_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
GOM96_07880
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sdeg01006
]
GOM96_07880
Enzymes [BR:
sdeg01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
GOM96_07880
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
GOM96_07880
2.5.1.29 geranylgeranyl diphosphate synthase
GOM96_07880
Prenyltransferases [BR:
sdeg01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
GOM96_07880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
QGW22996
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All DBs
Position
1706359..1707246
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AA seq
295 aa
AA seq
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MIVDYQKDCQQRVDSCLEALFAPPRPQLERLYQAMRYSVMNGGKRVRPLLVYAACEALRG
DRATADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA
FEAMAEEKHNPADAALRLRMFAVLARAAGPAGMVGGQAIDLGSVGLKLDRAALELMHRHK
TGALIEASVQLGALASGHADADSLGALSHYARSIGLAFQVQDDILDVESDTATLGKHQGA
DIARDKPTYPALLGLDEAKAYAIELRDQALHALRPFDIAAEPLRELARFIVERRS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atcatcgtcgactaccagaaagactgtcagcaacgcgtcgacagctgtctcgaagcgctc
ttcgcccccccgcgcccgcaactcgaacgcctctaccaggccatgcgatacagcgtgatg
aacggcggcaagcgcgtgcgcccgctgctggtgtacgccgcctgcgaagcgctgcgcggc
gaccgcgcgacggccgatggcgccgcctgcgcggtcgagctgatccacgcctactcgctg
gtgcacgacgacctgccggcgatggacgacgacgacctgcgtcgcggccagccgaccacc
cacaaggccttcgacgaagcctgcgcgattctcgccggcgatggcctgcagagcctggcc
ttcgaggcgatggccgaggaaaagcacaatcctgccgatgccgcgttgcgcctgcgcatg
ttcgccgtgctggcgcgtgccgcaggcccggccggcatggtcggcgggcaggccatcgac
ctcggttcggtcgggctgaaactcgatcgcgccgcgctggagctgatgcaccggcacaag
accggcgcgctgatcgaagccagcgtgcagctcggcgcactggccagcggccatgccgac
gccgacagcctcggcgcgctgagccactacgcccggtcgattggcctggcattccaggtg
caggacgacatcctcgacgtcgagagcgacaccgccacgctcggcaaacaccagggcgcc
gatatcgcccgcgacaagccgacctacccggcgttgctcggactggatgaggccaaggcc
tacgccatcgagctgcgcgatcaggccctgcatgcgctgcgccccttcgatatcgccgcc
gaaccgctgcgcgagctggcgcgtttcatcgtcgagcgccgcagctga
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