Stutzerimonas degradans: GOM96_08110
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Entry
GOM96_08110 CDS
T08431
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg00550
Peptidoglycan biosynthesis
sdeg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GOM96_08110
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdeg01002
]
GOM96_08110
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdeg01011
]
GOM96_08110
Enzymes [BR:
sdeg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GOM96_08110
Peptidases and inhibitors [BR:
sdeg01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
GOM96_08110
Peptidoglycan biosynthesis and degradation proteins [BR:
sdeg01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
GOM96_08110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
QGW20936
LinkDB
All DBs
Position
complement(1754362..1755531)
Genome browser
AA seq
389 aa
AA seq
DB search
MNIKTCMPRFIVFALLAIVTTATPVAWAAPAIPSPPQLAAKSYMLMDAASGKVLIESNSD
ERLPPASLTKLMTAYIATLEIQKGQISDSDMVTVSEKAWRTGGSRMFIQVNTQVSVDDLL
HGIIIQSGNDASVAMAEHIAGSEEAFADMMNTTAQRLGMSNTHFMNATGLPDPDHYSSAH
DMAKLARAIIYQDPAHYAIYAQKEFFWNNIKQPNRNLLLWRDKTVDGLKTGHTEEAGYCL
VASAVRDGMRLISVVFGTDSEQARAAETQKLLTYGFRFFETRTFYQKGVELAQQQVWKGQ
QSQVKAGLAEDLTLTLPRGQLDKLQASMSFSDTLIAPISQGQVVGKVEVKLGEEVLHSAD
LVALEAVEEGGLFRRLWDSIRLFFYSLFN
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaagacttgcatgcctcgcttcatagttttcgccttgctggcgatcgtcacc
actgccaccccagtggcctgggcggctcccgccatcccgtcgccgccgcagctggcggcc
aaatcctacatgctgatggacgcggccagcggcaaggtgctgattgaaagcaacagcgac
gagcgcctgccgcccgccagcctgaccaagctgatgaccgcctacatcgccacgctggag
atccagaaagggcagatcagcgacagcgacatggtgaccgtcagcgagaaggcgtggcgc
accggcggttcgcgcatgttcattcaggtcaatacccaggtctcggtggacgacctgctg
cacggcatcatcatccagtcgggcaacgatgcgagcgtggcgatggccgagcacatcgcc
ggcagcgaagaagccttcgccgacatgatgaacaccacggcgcagcgcctgggcatgagc
aacacccacttcatgaacgccaccggcctgccggacccggatcactactcctccgcccat
gacatggccaagctggcgcgcgcgatcatctaccaagacccggcgcactacgccatctac
gcgcagaaggaattcttctggaacaacatcaagcagcccaaccgtaacctgctgctgtgg
cgcgacaagaccgtcgacggcctgaagaccggccataccgaagaggctggctactgcctg
gttgcctcggctgtgcgcgatggcatgcgcctgatttcggtggtgttcggcaccgacagc
gagcaggcgcgcgctgccgaaacgcaaaaattgctgacctacggcttccgtttcttcgag
acccggaccttctaccagaaaggtgtcgaactggctcagcagcaggtctggaaagggcag
cagagccaggtcaaggccggcctcgccgaggatctgacgctgactctgccgcgtggccaa
ctggacaagctccaggccagcatgagcttcagcgacacgctgattgcaccgatcagccag
ggccaggtagtcggcaaggtcgaggtcaagctcggtgaggaggtgctgcacagcgccgat
ctggtcgcgctggaagcggtagaagaaggtgggctgttccgccgtctttgggatagcatt
cgcctgttcttctacagcctgttcaactga
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