Stutzerimonas degradans: GOM96_08720
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Entry
GOM96_08720 CDS
T08431
Name
(GenBank) type 2 isopentenyl-diphosphate Delta-isomerase
KO
K01823
isopentenyl-diphosphate Delta-isomerase [EC:
5.3.3.2
]
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg00900
Terpenoid backbone biosynthesis
sdeg01100
Metabolic pathways
sdeg01110
Biosynthesis of secondary metabolites
Module
sdeg_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
sdeg_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
GOM96_08720
Enzymes [BR:
sdeg01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.2 isopentenyl-diphosphate Delta-isomerase
GOM96_08720
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FMN_dh
PcrB
IMPDH
DHO_dh
Glu_synthase
Motif
Other DBs
NCBI-ProteinID:
QGW21054
LinkDB
All DBs
Position
complement(1889405..1890445)
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AA seq
346 aa
AA seq
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MADNELTTRKNDHLDIVLDPLRTRTGQRAGFAAWRFEHCALPELHLDAVDLSASLFGRPL
AAPLLIGSMTGGARRAETINRHLAEAAQELGIALAVGSQRVALESGASSHGLTGELRRLA
PDVPLLGNLGAAQLVQGYGVDEARRAVEMIEADALIIHLNPLQEAVQPGGDRDWRGVLAA
IERLAHALEVPLVAKEVGAGLSAAVARRLLDAGVAVLDVAGAGGTSWAAVEAARATTAHQ
RAVAEAFADWGIPTAEAIQTVRQACPQATLIGSGGIRDGIDAAKAIALGADLVAQAAAVL
DSALASPEAVVAHFRVLIEQLRIACFCSGSADLAALAQAPLVRIPA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaacgagctgaccacacgcaagaacgatcatctggatatcgtgctggacccg
ctgcgcacgcgcactggccagcgcgccggctttgccgcatggcgcttcgagcactgcgcg
ctgccggagctgcatctggatgcggtggacctctccgccagcctgttcggccgcccgctg
gccgcgccgctgctgatcggttcgatgaccggcggcgcccggcgtgcggaaacgatcaac
cggcacctcgccgaggccgcgcaggaactggggatcgctctggccgtaggctcgcagcga
gtggcgctggaatccggcgcgtccagtcacggcctgaccggcgagctgcgccggctggcg
ccggacgtgccgctgctgggcaacctcggcgccgcgcagctggtgcagggctacggcgtc
gatgaggcgcggcgcgcggtggagatgatcgaggccgatgcgctgattatccacctcaat
ccgctgcaggaagccgtgcaaccgggcggcgatcgcgactggcgcggcgtgctcgccgcc
atcgaacgactggcgcacgcgctggaggtgccgctggtggccaaggaggtcggcgccggg
ctgtcggccgcggtggcgcggcgcttgctggacgccggtgttgcggtgctcgacgtggcc
ggcgccggcggcaccagttgggcggcggtggaggcggcgcgggcgaccacggcacatcag
cgtgcggtggccgaggcgttcgccgactggggcattcccaccgccgaggcgatccagacg
gtacgtcaggcctgcccgcaggccacgctgatcggttccggtggtatccgcgacggtatc
gacgcggccaaggccatcgccctcggcgccgatctggtggcgcaggccgctgccgtgctg
gacagcgcgctagcgtcgccggaggcggtggtcgcgcactttcgcgtgttgatcgagcag
ctgcgcatcgcctgcttctgcagcggctcggcggacctcgccgcgctggcgcaggcgccg
ctggtccgcattcccgcctga
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