Stutzerimonas degradans: GOM96_10505
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Entry
GOM96_10505 CDS
T08431
Name
(GenBank) glycine--tRNA ligase subunit beta
KO
K01879
glycyl-tRNA synthetase beta chain [EC:
6.1.1.14
]
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GOM96_10505
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdeg01007
]
GOM96_10505
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdeg03016
]
GOM96_10505
Enzymes [BR:
sdeg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
GOM96_10505
Amino acid related enzymes [BR:
sdeg01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
GOM96_10505
Transfer RNA biogenesis [BR:
sdeg03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
GOM96_10505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
DALR_1
TPR_GEMI5
TPR_IF140-IFT172
Motif
Other DBs
NCBI-ProteinID:
QGW21397
LinkDB
All DBs
Position
complement(2268723..2270777)
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AA seq
684 aa
AA seq
DB search
MSALDFLVELGTEELPPKALKTLSEAFLAGIEKGLNDAGLGFVKAHAYAAPRRLAVLVEQ
LATQQPDRSVNLDGPPIQAAFDADGEPTQAALGFARKCGVDLAEIDRSGPKLKFSRTIEG
QPASQLLPGIVEASLNDLPIPKRMRWAARKDEFVRPTQWLVMLFGEQVLDCEILAQRAGR
ESRGHRFHSPGQVRISSPAGYLEDLRGAHVIADFAERRELIAKRVEQLAAEQNGTAIVPP
ALLDEVTALVEWPVPLVCSFEERFLEVPQEALISTMQDNQKYFCLLDANGKLLPRFITVA
NIESKDPAQIVSGNEKVVRPRLTDAEFFFKQDKKQPLERFNDRLKNVVFQAQLGTVFDKA
ERVSRLAGLIAERTGGDKARAMRAGLLSKADLATEMVGEFPEMQGIAGYYYALHEGEPQD
VALALNEQYMPRGAGGELPSTLTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAAL
GVLRILIEKQLDLNLVEAVNFAICQFGTQVKSAGLADQVLEFIFDRLRARYEDEGVDVAA
YLSVRAVQPGSALDFDQRVQAVQAFRTLPEAAALAAANKRVSNLLAKFEAKLPEAVEPRW
FDNATEFSLYSAIQQAEQAVQPLAAARQYREALERLAHLRGPVDAFFEAVLVNAEDASVR
ANRYALLARLRGLFLGVADISALG
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcattggattttctggtcgaactgggtaccgaagagctgccgcccaaggcactg
aaaaccctgagcgaggccttcctcgccggtatcgagaagggcctgaacgacgccggcctg
ggcttcgtcaaggcccacgcctacgccgcgccacgtcggctggcggtgctggtcgagcag
ctggcgacccagcagccggaccgcagcgtcaacctcgacggcccaccgatccaggctgcc
ttcgacgctgacggtgagccgacccaggctgccctgggtttcgcccgcaagtgtggcgta
gacctggccgagatcgatcgcagcgggccgaagctcaagttcagccgcaccatcgagggc
cagcccgccagccagttgctgccgggcatcgtcgaagcctcgctgaacgatctgccgatt
cccaagcgcatgcgctgggccgcacgcaaggacgagttcgtccgcccgacccagtggctg
gtgatgctgttcggcgagcaggtgctcgattgcgagatcctcgcccagcgcgccggccgc
gaatcgcgcggccaccgcttccacagtcccggtcaggtgcgcatctccagcccggcaggc
tacctggaggacctgcgcggcgcccacgtcatcgccgacttcgccgagcgccgcgagctg
atcgccaagcgcgtcgagcagctggcggccgagcagaacggtacggccatcgtgccgccg
gcgctgctcgatgaagtgactgcgctggtcgagtggccggtgccgctggtctgctcgttc
gaggaacgtttcctcgaggtaccgcaggaggcgctcatctccaccatgcaggacaaccag
aagtatttctgcctgctggatgccaacggcaaactgctgccgcgcttcatcaccgtggcc
aacatcgaatcgaaggacccggcgcagatcgtctccggcaacgagaaggtcgtgcgtccg
cgtctgaccgacgccgagttcttcttcaagcaggacaagaagcagccgctggaacgcttc
aacgatcgtctgaagaacgtggtgttccaggcccagctcggcaccgtgttcgacaaggcc
gaacgcgtctcgcgcctggccgggctgatcgccgagcgcaccggcggcgacaaggcgcgc
gccatgcgtgccggcctgctgagcaaggccgacctggccaccgagatggttggcgagttt
ccggaaatgcagggtatcgccggctactactacgcgctgcacgagggcgaaccgcaggac
gtggcgctggcgctgaacgagcagtacatgccgcgtggcgccggtggcgagctgccgagc
accctgaccggtgccgcggtggcagtggcggacaagctcgacaccctggtcgggatcttc
ggcatcggcatgctgccaaccggctccaaggacccctatgcactgcgccgcgctgccctc
ggcgtgctgcgcatcctcatcgagaagcagctggacctgaacctggtcgaggcggtgaac
ttcgccatctgccagttcggtacacaggtcaagtcggccggccttgccgatcaggtgctg
gagttcatcttcgaccgcctgcgtgcgcgctacgaggacgagggcgtcgacgtcgccgcc
tacctctcggtgcgtgccgtgcagcccggttcggcgctggacttcgatcagcgcgtgcag
gcggtgcaggccttccgcaccctgccggaagcagcggcgctggctgccgccaacaagcgc
gtctccaacctgctggccaagttcgaggccaagctgccggaagcggtcgaaccgcgctgg
ttcgacaacgccaccgagttctcgctgtattcggcgatccagcaggccgaacaggccgtg
cagccgctggccgccgcgcgccagtatcgcgaggcgctggagcgcctggcacacctgcgc
ggcccggtggatgccttcttcgaggcggtgctggtcaatgccgaggacgcctcggtgcgc
gccaaccgttatgccttgctggcccggctgagaggactgttccttggtgtcgccgatatt
tccgcacttggctaa
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