Stutzerimonas degradans: GOM96_10540
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Entry
GOM96_10540 CDS
T08431
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
sdeg
Stutzerimonas degradans
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdeg03009
]
GOM96_10540 (rsmB)
Enzymes [BR:
sdeg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
GOM96_10540 (rsmB)
Ribosome biogenesis [BR:
sdeg03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
GOM96_10540 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
FtsJ
Methyltransf_31
Methyltransf_11
MTS
AtzG-like
Methyltransf_15
Methyltransf_23
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
QGW21404
LinkDB
All DBs
Position
complement(2275521..2276870)
Genome browser
AA seq
449 aa
AA seq
DB search
MNPRLAAARALSVVLSGKASLGSSLPEVLGKVDARDRGLTQELAFGTARWQPRLAGLAAK
LLQKPFKAADHDVEALLLVGLYQLLHTRIPAHAAIGETVGCVDKLKKPWAKGLLNAVLRR
AQREGEALLAELEHDPVIRVAHPRWLQKALKAHWPDQWEAVCAANNAHPPMMLRVNRRQG
SREQYLAELQAAGIEAFACDFSEDGIRLASPCDVQQLPGFADGRVSVQDEAAQLAAGLLD
LGPGQRVLDACCAPGGKTCHLLEREPQLAEVVALDLEPKRLARVQENLDRLQLSARLLAA
DARAIDQWWDGRPFQRILLDAPCSATGVIRRHPDIKLTRQAEDIPPLAALQGELLDALWP
TLEVGGVLLYATCSVLPTENREVIAAFLARTPGARELDLPAGFGVTQPHGRQLLPQVDGH
DGFYYAKLIKIAAQPRGVSGANAVSGVQS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgcgcctggcggcggcccgtgcgctgagcgtcgtgctgtcgggcaaggcctcg
ctgggcagcagcctgcccgaggtgctcggcaaggtcgatgcgcgcgatcgcggcctgacc
caggagctggccttcggcactgcacgctggcaaccgcggctggccgggctggcggccaag
ctgctgcagaaaccgttcaaggccgccgatcacgacgtcgaggcgctgctgctggtgggc
ctctaccagttgctgcacacccgcatccccgcgcacgccgccatcggcgagacggtcggc
tgcgtcgacaagctgaagaagccctgggccaagggtctgctcaatgccgtgctgcgccgc
gcccagcgcgagggcgaggcgctgctggccgagctcgagcacgacccggtgatccgcgtc
gcccatccgcgctggttgcagaaggcgctcaaggcgcattggccggatcagtgggaagcg
gtctgcgccgccaataatgcgcatccgccgatgatgctgcgggtcaaccgtcgccagggc
agccgcgagcagtatctcgccgagctgcaggccgccggcatcgaagccttcgcctgcgat
ttcagcgaagacggtatccgcctggccagcccctgcgacgtgcagcagctgcccggcttc
gccgacggccgcgtcagcgtacaggacgaagccgcgcagctggccgccgggctgctcgat
ctcggccccggccaacgcgtgctggacgcctgctgcgcgccgggcggcaagacctgccac
ttgctcgaacgcgagccgcaactggccgaggtggtcgccctggatctggaacccaagcgg
ctggcccgggtacaggaaaacctcgaccgcttgcagctcagcgcccgcctgctggccgcc
gacgcccgcgccatcgaccaatggtgggacggaaggccgtttcagcgcatcctgctcgac
gcgccctgttcggcgaccggggtaattcgccggcatccggacatcaagctgacccggcag
gccgaggacattccaccgctcgccgcgctgcagggcgagctgctcgacgccttgtggccg
acgttggaagtcggcggcgtgctgctttatgcgacctgctcggtgctgccgaccgagaat
cgcgaggtgatcgccgccttcctcgcccgcacgccgggcgcacgcgagctggacctgccc
gccggcttcggcgtgacgcagccgcacgggcgccagctgctgccgcaggtcgacggtcac
gacggtttctactacgcaaagctgatcaagatcgccgcgcagccacgtggcgtatccggc
gctaacgccgtttcgggagtccagtcttga
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