KEGG   Stutzerimonas degradans: GOM96_11120
Entry
GOM96_11120       CDS       T08431                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
sdeg  Stutzerimonas degradans
Pathway
sdeg03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sdeg00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    GOM96_11120 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sdeg02044]
    GOM96_11120 (tssM)
Secretion system [BR:sdeg02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   GOM96_11120 (tssM)
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C IcmF_helical DUF4131 AAA_29
Other DBs
NCBI-ProteinID: QGW21515
LinkDB
Position
complement(2393554..2397093)
AA seq 1179 aa
MKTFFGKLGAVLRRTWVWSLLLVLLLAVVVWFVGPLLAVDDYRFWESSTARLLSISVLFL
GWGLAMVFASWRASARKKRDAEDQDVQEQLRRDGLIGEEQQELRHRFRQALRILKTSSLY
RGRSEKWRRELPWYLLIGPQGSGKTSLLDFSGLDFPLNRSEQQRLTKDVSGTRFADWYFA
DHAVLIDTAGRYLTQPDAAVDGSAWDTLLGLLRRRRARPLNGVLVNLPVDQLQGGSELEL
ENLARQTRQRLHEIHQRLSVDVPVYLVLSKADRILGFDEFFEQLSREESDQVLGASFRKE
QNGSDAQVVRQEFEELLRRLNSQVILRMHQERDTQRRGRILDFPHQLGQIGERLSLFIEL
AFAGNRYQRASQLRGFYLTSAPQLRETLDPLTAGIGRQLGLASSALPTFRSGRARFINQL
LSRVIFPEAELAGLDQREVRRIDWGQRALYAGAFGCLLLIGGAWALNFSGNHERLEQLRG
IAQQLGSERKTIEAGDEALRTLKALDASYAATEVFPPKDEVSWLRRGGLYQGEAVDPTLH
EAYRRDLEKLLLPRVGRQLEAQIRANLNDREQLLGSLRAYLMLNLAERRDAAFLKDWLAA
DWSLRHPGNTVAQQGLNTHFARLLEESFAPYQLNEKLVAKARAQLRSESLAAVVYRMLRD
QARNLPDYRLNTQLGPQASLFVGGDYTIPGFYTQRGYHKLFVAQGADLVSEILRDNWVLG
EGDSLSAKDLSRLLVEMEQLYFRDYAAHWSEAIAQLNILPAASAAQGSAQLAGLTAANSP
LLQLLLEVRENTRFAGFADATAEAGELADAAQDAGSKLGKAAKLATAAAEQAQAALLKNL
PDTARKALERRFAPLHQLLDENGAAGPELSASLQALDALQLQLASLAHASAPEQAAFEMA
KARMGGQRDAINQLRNSAARLPQPLGKWLGLLAEDSWSLVLSDAYHYLNQRYRNELYASY
RGALRERYPFSAHSASDVALADFREFFKAQGLADSFFERYLKPFVSGSAGQYQLRRVDGR
GLPLSEQFLAQMSRAQTIRRSFFAENPNEPLILFKLEPYSLDSSLGRADFRFGNQQLEYR
HGPIVQTAFRWPAEADDGRTSLVVEELGGRRVGIEKNTGPWSLFRLIDLMQVDYHSGRDV
LMLKADLGGLRANYLLHAQRSPNPFDLALLRGFKLPATL
NT seq 3540 nt   +upstreamnt  +downstreamnt
atgaagacgttcttcggcaaactcggcgccgtgctgcgccgaacctgggtctggagcctg
ctgctggtcctgttgctggcagtcgtggtgtggttcgtcgggccgctgctggcagtcgac
gactaccgattctgggaatcctcgaccgcccgcctgctgagcatcagcgtgctgtttctc
ggctggggcctggccatggtcttcgccagctggcgcgccagcgcgcgcaagaagcgcgac
gccgaggatcaggacgttcaggaacaactgcgccgcgacggcctgatcggcgaagagcaa
caggagttgcgccatcgcttcaggcaggcgctgcgtatcctgaagacctcgagcctctat
cgcgggcgcagcgagaaatggcgccgcgagctgccctggtacctgctgatcggccctcag
ggtagcggcaagaccagcctgctggacttctccgggctggattttccgctcaaccgcagt
gaacagcagcgcctgaccaaggatgtctccggcacccgctttgcagactggtacttcgcc
gatcatgccgtgctgatcgacaccgccggccgctatctgacccagcccgacgctgccgtc
gacggcagcgcctgggacaccctgctcggtctgctgcgcaggcgtcgtgcccgtccgctc
aacggcgtgctggtcaacctgccggtggaccagctgcagggcggcagtgaactggagctg
gagaaccttgcccgccagacccgtcagcgcctgcacgagatccatcaacgtctgagcgtg
gacgtgccggtctacctggtgctgagcaaggccgatcggattctcggtttcgacgagttc
ttcgagcagctgtcgcgggaggaaagcgaccaggtgctcggcgcgagtttccgcaaggag
cagaacggcagcgatgcgcaggtggtgcgccaggaattcgaggaactgctgcgccggctg
aacagccaggtgatcctgcgcatgcaccaggaacgcgatacacagcgccgcggccgaatc
ctcgacttcccacatcagctggggcagatcggcgagcgcctgagcctgttcatcgagctg
gcgttcgccggcaaccgctaccagcgcgccagccagctgcgtggtttctacctgaccagc
gcgccgcagctacgcgaaacgctcgatccgctcaccgccggcatcggccgccagctcggc
ctggccagcagcgcgctgccgacgttccgcagcggtcgcgcgcgcttcatcaatcagctg
ctcagccgggtgatcttcccggaagccgaactggcgggcctcgaccaacgcgaggtacgc
cgcatcgactggggccagcgtgccctctatgccggcgccttcggctgcctgctgctgatc
ggcggcgcctgggcgttgaacttctcgggcaaccatgagcgcctggaacagctgcgcggc
atcgcccagcaactcggcagcgagcgcaagaccatcgaggcgggagacgaggcgctacgt
acgctcaaggctctggacgcgagctatgcggcgaccgaggtgttcccgccgaaagatgag
gtgtcctggctgcgccggggcggcctgtatcagggcgaggcggtcgaccctacgctgcac
gaggcctaccgccgcgatctggagaaactgctgctgccacgtgtcggccggcagctggaa
gcgcagattcgcgccaacctgaacgaccgcgagcaactgctcggcagcctgcgcgcctat
ctcatgctgaacctggccgaacgccgtgatgcggcgtttctcaaggactggctggccgcc
gactggtcgctgcgccatccgggcaataccgtggcgcaacaggggctcaacacgcacttt
gcgcgcctgctggaggaatccttcgcgccgtatcagctgaacgaaaaactggtggccaag
gcccgcgcgcagttgcgcagcgaatcgctggcggcagtggtgtaccgcatgctgcgcgac
caggcgcgcaaccttcccgactatcgtctgaacacgcagctcggtccgcaggcgtccctg
ttcgtcggcggtgactacaccattccaggcttctacacccagcgcggctatcacaagctg
ttcgtcgcccagggcgccgatctggtcagcgagatactgcgcgacaactgggtgctgggc
gaaggcgacagcctcagcgccaaggacctcagccgtctgctggtggaaatggagcagctg
tatttccgcgactacgccgcacactggagcgaggcaatcgcccagctgaacatcctcccg
gccgccagtgcggcgcagggttccgcgcagctcgccgggctcaccgcggccaactcgccg
ctgctgcaactgctgctggaagtccgcgagaacacccgcttcgccggtttcgccgacgcg
actgcggaggcgggcgaactggccgatgccgcacaggacgcaggcagcaaactcggcaag
gcggccaaactggccaccgcagccgccgagcaggcgcaggctgcgctgctgaagaatctg
ccggacaccgcacgcaaggccctggagcgccgcttcgcgccgctgcaccagctgctcgac
gaaaacggcgccgccggccccgagttgagcgccagtctgcaggccctcgacgccctgcaa
ttgcagctggcctcgctggcccatgccagcgcaccggaacaggccgccttcgagatggcc
aaggcacgcatgggcggccagcgcgatgccatcaaccagctgcgcaacagcgctgcacgc
ctgccgcagccgctgggcaagtggctggggctgctggccgaggacagctggtcgctggtg
ctcagcgatgcctatcactacctcaaccagcgttatcgcaacgagctctacgccagctac
cgcggtgccctgcgcgagcgctatccgttcagcgcccacagcgccagcgacgtcgccctc
gccgacttccgcgagttcttcaaggcccagggcctggcggacagcttcttcgagcgctac
ctcaagcccttcgtcagcggcagcgccggccagtaccagctgcgccgggtcgacggtcgc
ggcctgccattgtccgagcagttcctcgcgcagatgagccgggcgcagaccattcgccgc
agcttcttcgccgagaaccccaacgagccgctgatcctgttcaagctcgaaccgtactcg
ctggattccagcctcggccgcgccgacttccgcttcggcaaccagcagctggagtaccgc
cacggaccgatcgtgcagaccgcgttccgctggccggccgaagccgacgacggacgcacc
agcctggtggtggaagaactcggcggccgtcgcgtgggtatcgagaagaacaccgggccc
tggtcgctgttccgcctgatcgacctgatgcaggtcgactaccacagcggccgcgacgtg
ctgatgctcaaggccgacctcggcggcctgcgcgccaactacctgctgcacgcccagcgc
tcgccgaatccgttcgacctcgcgctgttgcgcggcttcaagctgccggcgacgctgtga

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