KEGG   Stutzerimonas degradans: GOM96_11190
Entry
GOM96_11190       CDS       T08431                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
sdeg  Stutzerimonas degradans
Brite
KEGG Orthology (KO) [BR:sdeg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sdeg02044]
    GOM96_11190 (tssC)
Secretion system [BR:sdeg02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   GOM96_11190 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QGW21527
LinkDB
Position
complement(2410853..2412331)
AA seq 492 aa
MTTSAAAVEHGNHLAEGGILDRIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNENEPV
KKAMVDRMIAEIDAKLSRQMDEILHHPQFQALESSWRGLKLLVDRTNFRENIKLELLNAS
KQDLLDDFEDSPEIVQSGLYKHIYTAEYGQFGGQPVGALIANYFFDPSAPDVKTMQYVAS
VASMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFTKWQSFREQEDARYVGLTV
PRFLLRNPYDPEDNPVKSFVYKENVAGSHEHYLWGNTAYAFASRLTDSFAKFRWCPNIIG
PQSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFIALTMRKGSDNAAFFS
ANSAQKPKFFGNSEEGKTAELNYKLGTQLPYLFIVNRLAHYLKVLQREQIGAWKERTDLE
LELNKWIRQFVADQENPSSEVRSRRPLRAAQVNVSDVEGEPGWYRVSLSVRPHFKYMGAD
FTLSLVGKLDKE
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgaccactagcgcagccgccgtcgagcacggcaatcacctcgccgaaggcggcatcctc
gaccgcatcatcgccgaaacccgcctgaccccggacgacgaggcctacgatatcgccaag
cgcggcgtctcggccttcatcgaagaattgctcaagccgcagaacgaaaacgagccggtg
aagaaggcgatggtcgaccgcatgatcgcggagatcgacgccaagctcagccggcagatg
gacgaaatccttcaccacccacagttccaggccctggagtcctcctggcgcggcctgaag
ctgctggtggatcgcaccaacttccgcgagaacatcaagctcgagctgctcaacgcctcc
aagcaggacctgctggatgacttcgaggacagcccggagatcgtccagtccggcctgtac
aagcacatctacaccgccgaatacggccagttcggcggccagccggtcggcgcactgatc
gccaactacttcttcgaccccagcgcgcccgacgtgaagaccatgcagtacgtcgccagc
gtcgccagcatgtcccacgcgcccttcatcgccgctgccggcccgaaattcttcggcctg
gaaagcttcaccggcctgccggacctgaaggacctcaaggatcacttcgagggcccgcag
ttcaccaaatggcagagcttccgcgagcaggaagatgcccgctacgtcggcctgaccgtc
ccgcggttcctgctgcgcaatccgtacgatccggaagacaacccggtgaaaagcttcgtc
tacaaggaaaacgtcgccggcagccacgagcactacctgtggggcaacaccgcctacgcc
ttcgccagccgtctgaccgacagcttcgccaagttccgctggtgtccgaacatcatcggc
ccgcagagcggtggcgcagtggaagacctgcctctgcaccacttcgagagcatgggcgag
atcgagaccaagatcccgaccgaagtgctggtttccgaccggcgcgagtacgagctggcc
gaggaaggctttatcgccctgaccatgcgcaagggcagcgataacgcggcgttcttctcc
gccaattcggcgcagaagccgaagttcttcggcaacagcgaggaaggcaagaccgccgag
ctgaactacaagctcggtacccagctgccctacctgttcatcgtcaaccgcctggcgcac
tacctgaaggtgctgcagcgcgagcagatcggtgcatggaaggagcgcaccgacctcgaa
ctggaactgaacaagtggatccgccagttcgttgccgaccaggagaatccgagctccgaa
gtacgcagccgtcgtccgctgcgcgccgcccaggtcaacgtcagcgacgtcgagggcgag
ccgggctggtaccgcgtcagcctcagcgtgcgtccgcacttcaagtacatgggcgcggat
ttcaccctgtcgctggtcggcaagctggacaaggaataa

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