Stutzerimonas degradans: GOM96_11590
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Entry
GOM96_11590 CDS
T08431
Symbol
topB
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
sdeg
Stutzerimonas degradans
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdeg03032
]
GOM96_11590 (topB)
Enzymes [BR:
sdeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GOM96_11590 (topB)
DNA replication proteins [BR:
sdeg03032
]
Prokaryotic type
DNA Topoisomerases
GOM96_11590 (topB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QGW21599
LinkDB
All DBs
Position
complement(2498179..2500125)
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AA seq
648 aa
AA seq
DB search
MTSMRLFLCEKPSQAKDIAKVLGANRRGDGCWQGAGVSVTWCIGHLLETAPPDAYDARYK
RWNLADLPIVPQQWKMQVKPKTASQFKAVKRLLGECAELVIATDADREGEMIARELVEHC
RYRGPIQRLWLSALDEASIRKALGALKPGSATFNLYQAALGRSRADWLIGMNMSRLFTLL
GRQSGYQGVLPVGRVQTPTLRLVVDRDRSIADFMPVPFWAIDVQLLADGIPFTAQWRAAA
DACDEQGRCLKPELARDAAEAMRSAGSARLVELKTERMREAAPLPFDLGTLQEVCSKKLG
LGAQETLDIAQALYETHKLITYPRSDCGYLPLSQHAEAPAILAALGTADPALAALAPHLD
ARRRSRAWNDAKVSAHHGIIPTVAAQAAARLSGKPRAVYGLIRARYLAQFLPNHEYDRTQ
AEFSCAGQALRAVGKRIVEPGWRRALPEALRPVKGREAPEPQALPALAANQDCAVQEVTL
KDQHTQPPKPFTEGELIKAMKNVARLVDDPRLKQKLKDTTGIGTEATRAGIIQGLLERGY
LSKQGKALAATPAAFGLIDAVPRPIADPGTTAIWEQALDMVQNGEMSLEEFVVKQSAWMS
KLVERCAGLRLTISGPPVRGGAPWKKKRKAAAHKATTGKRRHAAAAPR
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcatgcggctctttctctgcgaaaaaccctcccaggccaaagacatcgccaag
gtgctcggcgccaaccggcgcggcgacggctgctggcagggtgccggcgtgagcgtgacc
tggtgcatcggccacctgctggagaccgcgccgccggatgcctatgacgcccgctacaag
cgctggaacctggccgatctgccaatcgtgccgcagcagtggaagatgcaggtcaagccg
aagaccgccagccagttcaaggcggtcaagcgcctgctcggcgagtgtgcggagctggtg
atcgccaccgacgccgaccgcgaaggcgagatgatcgcccgcgagctggtcgagcactgc
cgctatcgcgggccgatccagcggttgtggctgtcggcgctggacgaggcgtcgatccgc
aaggcgctcggcgcgctcaagccgggcagcgcaaccttcaatctctaccaggccgcgctg
ggacgctcgcgtgccgactggctgatcggcatgaacatgagccgactattcaccctgctc
ggccgccagtccggctaccagggcgtgcttccggtgggccgcgtgcagaccccgaccctg
cgcctggtggtcgaccgcgaccgcagcatcgccgacttcatgccggtgccgttctgggcc
atcgacgtgcagctgctggccgacggcattcccttcaccgcgcagtggcgggccgcggcg
gatgcctgcgacgaacagggccgttgcctgaagcccgagctggcgcgtgacgccgccgag
gcgatgcgtagcgccggcagcgcgcggctggtcgagttgaagaccgaacggatgcgcgag
gcggcgccgctgccgttcgatctcggcacgctgcaggaggtctgctcgaagaagctcggc
ctcggcgcccaggaaaccctcgacatcgctcaggcgctgtacgaaacgcacaagctcatc
acctacccccgcagcgactgcggttacctgccgctcagccagcacgccgaagccccggcg
atcctcgccgcactgggtactgccgatccggcgctggctgccctggcgccgcacctcgac
gcccggcgccgttcgcgggcctggaacgatgcgaaagtgagcgcgcaccacggcatcatt
cccaccgtcgccgcgcaggccgcggcgcgcctgagcggcaagccgcgcgccgtctacggg
ctgatccgcgcacgctatctggcgcagttcctgcccaaccacgagtacgaccgcacccag
gccgagttcagctgcgccggccaggcgctgcgcgcggtgggcaagcgcatcgtcgagccg
ggctggcgccgtgcgctgcccgaggcgctgaggccggtcaaaggccgcgaagcgcccgaa
ccgcaggcgctgccggcactcgccgcgaaccaggactgcgcggtgcaagaggtaacgctc
aaggaccagcacacccaaccccccaagccgttcaccgagggcgaactgatcaaggcgatg
aagaacgtcgccaggctggtcgacgacccgcgcctgaagcagaagctcaaggacaccacc
ggcatcggcaccgaggcgacgcgcgccgggatcatccagggcctgctcgaacgcggctac
ctgagcaagcagggcaaggcgctggccgccacgcccgcggcgttcggcctgatcgacgcg
gtgccgcggccgatcgccgaccccggcaccacggcgatctgggagcaggcgctggatatg
gtgcagaacggcgagatgtcactggaggaattcgtcgtcaagcagtcggcgtggatgagc
aagctggtcgaacgctgcgccggcttgcgcctcaccatcagcgggccgcccgtgcgcggc
ggcgcgccctggaagaaaaaacgcaaggccgccgcacacaaagcaaccaccggcaagcgc
cgccacgccgcggccgccccgcgctga
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