KEGG   Stutzerimonas degradans: GOM96_12485
Entry
GOM96_12485       CDS       T08431                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
sdeg  Stutzerimonas degradans
Pathway
sdeg00300  Lysine biosynthesis
sdeg00470  D-Amino acid metabolism
sdeg01100  Metabolic pathways
sdeg01110  Biosynthesis of secondary metabolites
sdeg01120  Microbial metabolism in diverse environments
sdeg01230  Biosynthesis of amino acids
Module
sdeg_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:sdeg00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    GOM96_12485 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    GOM96_12485 (dapF)
Enzymes [BR:sdeg01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     GOM96_12485 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: QGW21770
LinkDB
Position
complement(2700637..2701467)
AA seq 276 aa
MLLRFTKMHGLGNDFMVIDLVSQHAHIQPKHARQWGDRHTGIGFDQLLIVEPPQNPDVDF
RYRIFNADGSEVEQCGNGARCFARFVVDKRLTVKRKIKVETKGGIIELDIRPDGQIRVDM
GPPRLQPADIPFQADAEALSYPLDVAGRRVELAAVSMGNPHAVLCVDSVDNAPVHELGPQ
IEHHPRFPQRVNVGFLQVIDRGHARLRVWERGAGETQACGTGACAAAVAAIRQGWMDSPV
QIDLPGGRLSIEWAGPGQPVMMTGPAVRVFEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgcttttgcgctttaccaagatgcacgggctgggcaacgacttcatggtcatcgacctg
gtcagccagcacgcgcacatccagcccaagcacgctaggcagtggggcgaccgccacacc
ggcatcggcttcgatcagttgttgatcgtcgaaccgccgcagaatccggacgtcgacttc
cgctaccgcatcttcaatgccgacggctcggaagtggagcagtgcggtaatggcgcgcgc
tgcttcgcccgcttcgtggtcgacaagcgcttgaccgtcaaacgcaagatcaaagtcgaa
accaagggcggcatcatcgagctggacatccgccccgatgggcagattcgcgtcgacatg
gggccgccccgcctgcagcccgcggacatcccttttcaggccgacgccgaggcgctgagt
tacccgctggatgtggccggccgccgcgtggagcttgccgccgtgtcgatgggcaacccc
catgccgtgctgtgcgtcgacagcgtcgacaatgcgcccgtgcacgaactgggaccgcag
atcgaacaccacccgcgcttcccgcagcgggtcaacgtcggcttcctgcaggtgatcgac
cgtggccatgcgcgcctgcgcgtgtgggaacgcggagccggcgagacccaggcctgcggc
accggcgcctgcgccgcggcggtcgcggcgatccgccagggctggatggattcgccggtg
cagatcgacctgcccggcggccgtctgtccattgaatgggcaggtcccggccagcccgtt
atgatgaccggccccgccgttcgcgttttcgaaggacaggttcgcctatga

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