KEGG   Stutzerimonas degradans: GOM96_12490
Entry
GOM96_12490       CDS       T08431                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
sdeg  Stutzerimonas degradans
Pathway
sdeg00300  Lysine biosynthesis
sdeg00470  D-Amino acid metabolism
sdeg01100  Metabolic pathways
sdeg01110  Biosynthesis of secondary metabolites
sdeg01120  Microbial metabolism in diverse environments
sdeg01230  Biosynthesis of amino acids
Module
sdeg_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:sdeg00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    GOM96_12490 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    GOM96_12490 (lysA)
Enzymes [BR:sdeg01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     GOM96_12490 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N DUF1955
Other DBs
NCBI-ProteinID: QGW21771
LinkDB
Position
complement(2701478..2702725)
AA seq 415 aa
MEAFSYRDGQLFAEGVALPALAQRFGTPTYVYSRAHIEAQYRAYADALDGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSCGELERVLAAGGQPDRIVFSGVGKTRDDMRRALEVGVH
CFNVESTDELERLQQVAAELGVKAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA
VYARAAELANLQVVGVDCHIGSQLTSLPPFLDALDRLLGLIDRLAARGIHIRHLDLGGGL
GVRYRDEQPPLAGDYIQAVRQRIEGRGLALVFEPGRSIVANAGVLLTRVEYLKHTAHKDF
AIVDAAMNDLIRPALYQAWMNVVAVQPRQGEGRRYDIVGPICETGDFLAKDRILELAEGD
LLAVCSAGAYGFVMSSNYNTRGRAAEVLVDGDEAFEVRRRESVQELYAGESLLPR
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggaggccttctcgtaccgcgacggtcaactcttcgcggagggcgtggcgctgcctgcc
ctcgcacaacgcttcggcacaccgacctacgtctattcgcgcgcgcacatcgaagcccag
taccgggcctatgccgatgcgctggatggcatgccgcatctggtctgcttcgccgtcaaa
gccaattcgaacctgggcgtactgaacgtgctggcgcgcctcggcgcaggcttcgacatc
gtctcgtgcggtgaactggagcgcgtgctggccgccggcggccagccggaccgtatcgtc
ttctccggcgtcggcaagacccgcgacgacatgcgtcgcgcgctggaagtcggcgtgcac
tgcttcaacgtcgaatccaccgacgagctggagcgcctgcagcaggtcgccgccgagctg
ggcgtcaaggctccggtgtcgctgcgggtcaacccggacgtcgacgccggcacccacccg
tacatttccaccgggctgaaagagaacaagttcggcattgccatcgccgatgccgaagcg
gtctacgcccgcgccgccgagctggcgaatctgcaagtggtcggcgtcgattgccatatc
ggctcgcagctgaccagtctgccgccgttcctcgatgcgctggaccgcctgctggggctc
atcgaccgcctggccgcgcgcggcatccacatccgtcacctggacctgggcggcggtctc
ggcgtgcgctaccgcgatgagcagccgccgctggccggcgactacatccaggccgtgcgc
cagcgcatcgaaggtcgcggcctggcgctggtgttcgaaccgggtcgctcgatcgtcgct
aacgccggcgtgctgctgacccgcgtggaatacctcaagcacaccgcgcacaaggatttc
gccatcgtcgacgcggcgatgaacgacctgatccgcccggcgctctaccaggcctggatg
aacgtcgttgcggtgcagccgcgccagggcgaaggccgccgttacgacatcgtcggaccg
atctgcgagaccggcgacttccttgccaaggaccgcatcctggagctggccgagggcgac
ctgctggccgtctgctcggccggtgcctacggtttcgtcatgagctccaactacaacacc
cgcggccgcgccgccgaggtgctggtggatggcgacgaggcctttgaagtacgccgtcgc
gaaagcgtgcaggaactctacgccggcgaaagcctgctgccccgttga

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