Stutzerimonas degradans: GOM96_12670
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Entry
GOM96_12670 CDS
T08431
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sdeg
Stutzerimonas degradans
Pathway
sdeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GOM96_12670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdeg03400
]
GOM96_12670
Enzymes [BR:
sdeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GOM96_12670
DNA repair and recombination proteins [BR:
sdeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GOM96_12670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_16
TrwB_AAD_bind
AAA_22
AAA_25
iSirtuin
Zn_ribbon_6
PIF1
Zn_ribbon_12
HypA
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
QGW21804
LinkDB
All DBs
Position
complement(2737901..2740123)
Genome browser
AA seq
740 aa
AA seq
DB search
MPTTILRLALPSPLRRLFDYLPPAGCAIAALQPGVRLRVPFGRREVVGVLVELSDHSEVP
EAKLKPALELLDRQPLLPVALFRLCLWAAQYYQHSLGDTFSWALPALLRQGEAAEARQER
FWQLAEGARADDPRLARAPRQREALKTIAQHPHGVPHSLLGKLQLNRDSLELLLDKRLLR
IDSRRRSQSRSHSGSWLLQSELALNSEQRAAFEAIRAGLGGFQAFLLAGVTGSGKTEVYL
QLIHQVLAAGKQALVLIPEINLGPQTLARFEQRFNARIALLHSSVNDRERLDAWLAARDG
EADIVIGTRSALFTPLKNPGLIIIDEEHDASYKQQEGLRYHARDLALLRARQENLPIVLG
SATPSLESLHNAHAGRYALLKLTRRAGGAQPPRFLRLDVKSRPLDSGISGPLQQAIAQTL
AAGQQVLVFLNRRGFAPTLLCHDCGWLSQCPRCDARMTLHQRHHELRCHHCGHVERPPSN
CPQCAKVDLRPVGAGTERAEERLGILFPDYPVLRIDRDSTARKGAMEQLFGTINRGEPCL
LVGTQMLAKGHHFPRVTLVAILDADGGLFSADFRASERMAQLIVQVAGRAGRAEEPGRVI
IQTHLADHPLLVQLTEQGYFAFAEQALSERRAAGLPPFSHLALLRAEAHRPGQAEEFLEQ
ACSLAERLLDELQLGGIELLGPVPAPMERRAGRYRAQLLLQGNSRAPLHRLMSAWLVQLE
QLPGGRAVRWSLDVDPIDLF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
gtgcccacgaccatccttcgcctggccctaccctcgccgctgcgccgcctgttcgactat
ctgccgccggccggctgcgcaatcgccgcgctgcaaccgggggtgcgcctgcgcgtgccc
ttcggccggcgcgaggtagtgggcgtactggtcgagctgtccgaccacagcgaagtgccg
gaggcgaagctcaagccggcactcgaactgctcgaccgccagccgctgctgccggtcgca
ttgttccgactctgtctgtgggccgcccagtattaccagcacagcctgggcgacaccttc
agctgggcattgccggcactgctgcgtcagggcgaggcggcggaagcgcggcaggagcgt
ttctggcagctggccgaaggcgcccgcgccgacgatccgcgcctggcacgcgcgccgcgc
cagcgtgaagcgctcaagaccatcgcccagcacccgcacggcgtaccgcacagcctgctc
ggcaagctgcagctgaaccgcgacagcctcgaactgttgctggacaaacgcctgctgcgc
atcgacagccggcgccgcagccagtcgcgcagccacagcggcagttggctgctgcaatcg
gagctggcactcaacagcgaacagcgcgcggccttcgaggccatccgtgccggactgggc
ggcttccaagcgtttctactcgccggcgttaccggcagcggcaagaccgaggtctatctg
cagctgatccatcaggtgctcgccgccggcaaacaggcactggtgctgattccggaaatc
aatctcgggccgcagacgctggcgcgcttcgagcagcgcttcaacgcccgcatcgccctg
ctgcactccagcgtgaacgaccgcgagcgcctggatgcctggctcgcagcacgcgacggc
gaagcggatatcgtcatcggtacgcgctctgcgctgttcacgccgctgaagaaccccggc
cttatcatcatcgatgaggaacacgacgcctcctataaacagcaggaggggctgcgctac
cacgcccgcgacctcgccctgctgcgcgctcgccaggagaatctgccgatcgtgctcggc
tcggccacgccgtcgctggagagcctgcacaacgcccacgctggccgctacgccctgctc
aagctgacccgtcgcgccggtggcgcccagccaccacgtttcctgcgcctggacgtcaag
agccgcccactcgattcgggcatctccggcccgctgcagcaggcgatcgcgcagaccctg
gcggccggccagcaagtgctggtgttcctcaaccgccgcggcttcgcccccacactgctg
tgccacgattgcggctggctcagccagtgcccgcgctgcgatgcgcgcatgaccctgcac
cagcgccaccacgaactgcgctgccaccattgcggacatgtcgaacgcccgccgagcaat
tgcccacagtgcgccaaggtcgatctgcgcccggtcggcgccggtaccgaacgcgccgag
gagcggctcggcattctctttcccgattacccggtgctgcgcatcgatcgcgacagcacc
gcgcgcaagggcgcgatggagcagctgttcggcaccatcaaccgcggagagccgtgtctg
ctggtcggcacacagatgctcgccaagggccaccattttccgcgggtgacgctggtggcg
atcctggacgccgatggcgggttgttctccgccgattttcgcgctagcgaacgcatggcg
cagctgatcgtccaggtcgccggacgcgccggacgcgccgaggaacccgggcgcgtgatc
attcagacccatctggccgatcatccgctgctcgtgcagctcaccgaacaaggctatttc
gctttcgccgagcaggcgctttctgagcggcgcgccgccggtctgccaccgttcagccat
ctcgcactgctgcgcgccgaggcgcaccggccgggtcaggcggaagaatttctcgaacag
gcctgcagtctggccgaacgactactggacgaactgcagctcggcggcatcgagctgctc
ggcccggtgcccgcaccgatggaacgccgcgccggacgctatcgcgcacagctgctgctg
caaggtaacagccgcgcgcctctgcaccgcctgatgagcgcctggctggtgcagctcgag
caattgccgggcggacgggcggtgcgctggtcgctggatgtcgatccgatcgatcttttc
tag
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integrated database retrieval system
