KEGG   Stutzerimonas degradans: GOM96_13430
Entry
GOM96_13430       CDS       T08431                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
sdeg  Stutzerimonas degradans
Pathway
sdeg00740  Riboflavin metabolism
sdeg01100  Metabolic pathways
sdeg01110  Biosynthesis of secondary metabolites
sdeg01240  Biosynthesis of cofactors
sdeg02024  Quorum sensing
Module
sdeg_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:sdeg00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    GOM96_13430 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GOM96_13430 (ribD)
Enzymes [BR:sdeg01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     GOM96_13430 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     GOM96_13430 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: QGW21942
LinkDB
Position
2885623..2886726
AA seq 367 aa
MSASDHAWMARALQLARKGLYSTHPNPRVGCVIVADGELVGEGWHVRAGEPHAEVHALRQ
AGERARGATAYVTLEPCSHHGRTPPCAEALVKAGVGRVVAAMQDPNPQVAGRGLQLLRSA
GIDVASGVLEAEARELNGGFIKRMESALPYVRAKLAMSLDGRTAMASGESQWITGPAARA
EVQRLRARSSVVLTGADTVLMDAARLTVRGAELGLDAETTALALARPPLRVLVDGRLRVP
LDAPFFQAGPALVVTAVAGGEETYRCAGHEALVLGQERVDLTALLRELAARGANEVLVEA
GPRLIGAFARLGLIDEYQVFMAAKFLGSSARPLLELPLERMSEARELKIVDIRAVGDDWK
IVAIPAR
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgagcgccagcgatcacgcctggatggcccgcgcgctgcagctggcgcgcaaggggctg
tattcgacccatccgaacccgcgggtcggttgcgtcatcgtcgcggatggggagctggtt
ggcgaaggctggcatgtacgcgccggcgagccgcatgccgaggtccatgcgctgcgccaa
gccggcgaacgggcccgcggcgccaccgcctacgtcaccctcgaaccctgcagccaccac
gggcgcacgccgccctgtgccgaagcgctggtcaaggccggcgtcggccgcgtggtggcg
gccatgcaggacccgaacccgcaggtcgccgggcgcggcctgcaattgctgcgcagcgcc
ggcatcgacgtcgccagcggcgtgctggaagccgaggcgcgcgagctcaacggcggcttc
atcaaacgcatggaaagcgcgctgccgtacgtgcgcgccaagctggcgatgagcctggac
ggacgcacggcgatggccagcggcgagagccagtggatcaccggcccggcggcgcgcgcg
gaggtgcagcgcctgcgcgcccgctccagcgtggtgctgacgggcgccgacaccgtgctg
atggatgccgcgcggctgaccgtgcgcggcgccgaactggggctggacgcggaaaccacc
gcgctggcgcttgcgcgcccgccgttgcgggtgctggtcgatggtcggctgcgcgtgccg
ctggatgcgccgttcttccaggctggtccggcgctggtcgtcacggcggttgcggggggc
gaggaaacctatcgttgcgccggccacgaggcgctggtgctggggcaggagcgggtcgac
ctaactgcgctgctgcgcgagctggctgcccgtggtgccaacgaggtgctggtcgaggcc
ggaccgcggctgatcggtgcgttcgcccgtctcggcctgatcgacgaataccaggtgttc
atggccgccaagttcctcggttcctcggcgcggccgctgctggagctgccgctcgagcgg
atgagcgaggcgcgcgagctgaagatcgtcgacatccgcgcggtgggcgacgactggaag
atcgtcgcgattcccgcccgctga

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