Stutzerimonas degradans: GOM96_13485
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Entry
GOM96_13485 CDS
T08431
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
sdeg
Stutzerimonas degradans
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdeg02000
]
GOM96_13485
Transporters [BR:
sdeg02000
]
Other transporters
Pores ion channels [TC:
1
]
GOM96_13485
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QGW21953
LinkDB
All DBs
Position
complement(2894131..2896002)
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AA seq
623 aa
AA seq
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MKLSRLALAVALLPGTQVFADTTDANSYQLPNMLVTSARQAEPRATATAANTVFTRADIQ
RLQARSVPELLRRVPGVTVGSAGGLPSLSLRGTGTAQTLVLLDGQRISSATSGFARLDYL
AIDNIERVEVIRGPRSSLYGADAIGGVIQIFTRSGKPGVKPEIRLAAGSDQTFQRSLSLA
AGTEQTRVHLGASLDERDGFDISRDNRGADSDDDGQRAQALHLKLDHQLNADWQAGLSLN
DQRGENEYDDAYDFAPGTPQDEFRVSSYSGYLNGQLTDVWNSRLELGRSFDRNKVVGASS
PWNNGFLETTRHSAAWINRLQLSERQQLSLGSDWYEDRLDASTAYQEDSRDNLAFFAQHS
FQGDRFGTELGLRHDDNEQFGSHNSWNAAFSLPVGESQRWILSYGEGFRAPTFSDLYYPG
MGNADLSPETSKTYELQWRADLEGTRLEASVYRTDVEDLIAWNSAANRPENISQARINGF
EASVARELLGWQASLGVSVIDPRDRDSGHALPRRAKRTLSIDLDREFGSLSAGAGWHVAS
ARQDNAANTRELAGYGVFDLRAGWQSHPELLWEAKVNNLFDREYTLATYDRPTGPGWTDP
VLNYGYREAGRTVLFAMTWTPSL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgtcccgacttgccctggccgtggcgctgctgcctggcacgcaggtgtttgcc
gacactaccgacgccaacagctaccagctgcccaacatgctggtgacttccgcgcgccag
gccgagcctcgcgccaccgccaccgccgccaacaccgtattcacccgcgccgatatccag
cgcctgcaggcgcgcagcgtgccggaactgctgcgccgggtgccgggcgtgaccgtcggc
agcgccggcggcctgccgtcgctgtcgctgcgcggcaccggcaccgcgcagacgctggtg
ctgctcgatggtcagcgcatttcctcggccaccagcggcttcgcccgtctcgattacctg
gcgatcgacaatatcgagcgcgtcgaagtgatccgcggcccgcgctcgtcactctatggt
gccgatgcgatcggcggcgtcatccagatcttcacgcgcagcggcaagcccggagtgaag
ccggaaatccgcctcgcggccggcagcgaccagaccttccagcgcagcctgagcctggcg
gctggcaccgagcagacccgcgtccatctcggcgcgagtctcgacgagcgtgacggtttc
gatatcagccgcgacaaccgcggtgccgacagcgacgacgacggccagcgtgcgcaggca
ctgcacctgaagctggatcaccagctcaatgccgactggcaggcgggcctcagcctcaac
gatcaacgcggcgagaacgaatacgacgatgcctacgacttcgccccgggcacaccgcag
gacgagtttcgtgtcagcagctacagcggttacctgaacggtcagctgaccgacgtctgg
aacagccgtctggaactgggccgcagcttcgaccgcaacaaggtggtcggcgccagcagt
ccctggaacaacggctttctggaaaccacacggcattcggcggcctggataaaccggctg
caactgagcgaacgccagcagttgagtctgggcagcgactggtacgaagaccgtctcgac
gcatccaccgcctatcaggaagacagccgcgacaacctggccttcttcgcccagcacagc
ttccagggcgaccgtttcggtaccgaactcggcctgcgccacgacgacaacgaacagttc
ggcagccacaacagctggaacgccgccttcagcctgccggtgggcgagtcgcagcgctgg
atcctcagctacggcgaaggcttccgtgcgccgaccttctccgatctctattaccccgga
atgggcaatgccgacctgagcccggaaacgtcgaagacctacgagctgcaatggcgcgcc
gacctggaaggcactcggctggaggcctcggtctaccgcaccgacgtggaagacctgatt
gcctggaacagtgcagccaaccgcccggagaacatcagccaggcgcggatcaacggcttc
gaggccagcgtggctcgcgaactgctgggctggcaggccagtctgggcgtgagcgtcatt
gatccgcgtgatcgcgacagcggtcatgccctgccccgccgtgccaagcgcacgctcagt
atcgacctcgatcgcgaattcggcagcctgtcggccggcgccggctggcacgtcgccagc
gcacgccaggacaatgcggccaatacccgcgagctggccggctacggcgtcttcgatctg
cgcgcgggctggcagagccaccccgagctgctctgggaggccaaggtcaacaacctgttc
gaccgcgaatatacgctggcaacctacgaccgccccaccggcccaggctggaccgatccg
gtgctgaactacggttatcgcgaagccggacgcaccgtcctgttcgccatgacctggacc
ccttcgctctaa
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