Stutzerimonas degradans: GOM96_13720
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Entry
GOM96_13720 CDS
T08431
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
sdeg
Stutzerimonas degradans
Brite
KEGG Orthology (KO) [BR:
sdeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdeg03016
]
GOM96_13720 (trmA)
Enzymes [BR:
sdeg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
GOM96_13720 (trmA)
Transfer RNA biogenesis [BR:
sdeg03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
GOM96_13720 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_4
Methyltransf_11
Methyltransf_12
Cons_hypoth95
DREV
MTS
Ubie_methyltran
Methyltransf_15
PrmA
TRM5-TYW2_MTfase
RrnaAD
Motif
Other DBs
NCBI-ProteinID:
QGW21999
LinkDB
All DBs
Position
complement(2942497..2943585)
Genome browser
AA seq
362 aa
AA seq
DB search
MTQLRFDPACYDSQLADKAARLQALLAPFAAPAAEVFDSPREHYRLRAEFRLWREDGQRH
YAMFEPGDKHKAILIDEFPIASRRINQLMPQLKAAWQASEVLSFKLFQVEFLTTLSGDAL
ITLAYHRPLDDAWQAAAEQLATNLGVSLVGRSKGKRIVIGRDYVEEELVVAGRSFRYRQP
EGAFTQPNGVVCQKMLNWAFDALGQRDDDLLELYCGNGNFTLPLATRVRRVLATEISKTS
VNAALANIADNGIDNIELVRLSAEELTQALNEVRPFRRLADIDLKSYQFGSVFVDPPRAG
MDPDTCELTRRFERILYISCNPETLAANIAQLADTHRIERCALFDQFPYTHHMESGVLLV
RR
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcttcgcttcgaccccgcctgctacgacagccaactcgccgacaaggccgcg
cgcctgcaggcactgctcgcgcccttcgccgcccccgccgcggaggtcttcgactcgccg
cgtgagcattaccgcctgcgcgccgaattccgcctgtggcgcgaagacggccagcgccat
tacgcgatgttcgagccgggcgacaagcacaaggcgatcctgatcgacgagttccccatc
gccagccgccgtatcaaccagctgatgccacagctgaaggccgcctggcaggcgtccgaa
gtgctgagcttcaagctgttccaggtggagtttctcaccaccctgagcggcgatgcgctg
atcaccctcgcctaccaccgcccgctggacgacgcctggcaggccgcagccgaacagctc
gccaccaatctcggtgtcagcctggtcggccgttccaagggcaagcgcatcgtcatcggg
cgtgattacgtggaagaagaactggtggtcgccggccgcagcttccgctaccgccagcct
gaaggggcgttcacccagcccaacggtgtggtctgccagaagatgctcaactgggccttt
gatgccctcggccagcgcgacgacgatctgctggagctctactgcggcaacggcaacttc
accctgccgctggccacccgcgtgcgccgcgtgctcgccaccgagatcagcaagacctcg
gtgaatgccgcgctggccaatatcgctgacaacggtatcgacaacatcgagctggtgcgc
ctctccgccgaggagctgacccaggcgctcaacgaggtgcggccgttccgtcgcctggcc
gacatcgacctgaagagctaccagttcggcagcgtcttcgtcgatccgccgcgcgccggc
atggacccggacacctgcgagctgacccgccgcttcgagcgcatcctctacatctcctgc
aacccggaaaccctggccgccaacatcgcccagctggccgacacccaccgcatcgaacgc
tgcgccctgttcgaccagttcccctacacccaccacatggagtccggggtgctgctggtc
cgccgctga
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